Literature DB >> 29892227

Towards a Computational Framework for Modeling the Impact of Aortic Coarctations Upon Left Ventricular Load.

Elias Karabelas1, Matthias A F Gsell1, Christoph M Augustin1,2, Laura Marx1, Aurel Neic1, Anton J Prassl1, Leonid Goubergrits3,4, Titus Kuehne3,4, Gernot Plank1.   

Abstract

Computational fluid dynamics (CFD) models of blood flow in the left ventricle (LV) and aorta are important tools for analyzing the mechanistic links between myocardial deformation and flow patterns. Typically, the use of image-based kinematic CFD models prevails in applications such as predicting the acute response to interventions which alter LV afterload conditions. However, such models are limited in their ability to analyze any impacts upon LV load or key biomarkers known to be implicated in driving remodeling processes as LV function is not accounted for in a mechanistic sense. This study addresses these limitations by reporting on progress made toward a novel electro-mechano-fluidic (EMF) model that represents the entire physics of LV electromechanics (EM) based on first principles. A biophysically detailed finite element (FE) model of LV EM was coupled with a FE-based CFD solver for moving domains using an arbitrary Eulerian-Lagrangian (ALE) formulation. Two clinical cases of patients suffering from aortic coarctations (CoA) were built and parameterized based on clinical data under pre-treatment conditions. For one patient case simulations under post-treatment conditions after geometric repair of CoA by a virtual stenting procedure were compared against pre-treatment results. Numerical stability of the approach was demonstrated by analyzing mesh quality and solver performance under the significantly large deformations of the LV blood pool. Further, computational tractability and compatibility with clinical time scales were investigated by performing strong scaling benchmarks up to 1536 compute cores. The overall cost of the entire workflow for building, fitting and executing EMF simulations was comparable to those reported for image-based kinematic models, suggesting that EMF models show potential of evolving into a viable clinical research tool.

Entities:  

Keywords:  arbitrary Lagrangian-Eulerian formulation; cardiac mechanics; computational fluid dynamics; finite element model; patient-specific modeling; total heart function; translational cardiac modeling

Year:  2018        PMID: 29892227      PMCID: PMC5985756          DOI: 10.3389/fphys.2018.00538

Source DB:  PubMed          Journal:  Front Physiol        ISSN: 1664-042X            Impact factor:   4.566


  44 in total

1.  The Physiological Principle of Minimum Work: I. The Vascular System and the Cost of Blood Volume.

Authors:  C D Murray
Journal:  Proc Natl Acad Sci U S A       Date:  1926-03       Impact factor: 11.205

2.  Multidirectional WSS disturbances in stenotic turbulent flows: A pre- and post-intervention study in an aortic coarctation.

Authors:  Magnus Andersson; Jonas Lantz; Tino Ebbers; Matts Karlsson
Journal:  J Biomech       Date:  2016-11-28       Impact factor: 2.712

3.  Cardiac MRI based numerical modeling of left ventricular fluid dynamics with mitral valve incorporated.

Authors:  Boyang Su; Ru San Tan; Ju Le Tan; Kenneth Wei Qiang Guo; Jun Mei Zhang; Shuang Leng; Xiaodan Zhao; John Carson Allen; Liang Zhong
Journal:  J Biomech       Date:  2016-03-10       Impact factor: 2.712

4.  Accelerating cardiac bidomain simulations using graphics processing units.

Authors:  A Neic; M Liebmann; E Hoetzl; L Mitchell; E J Vigmond; G Haase; G Plank
Journal:  IEEE Trans Biomed Eng       Date:  2012-06-05       Impact factor: 4.538

5.  Patient-specific MRI-based 3D FSI RV/LV/patch models for pulmonary valve replacement surgery and patch optimization.

Authors:  Dalin Tang; Chun Yang; Tal Geva; Pedro J Del Nido
Journal:  J Biomech Eng       Date:  2008-08       Impact factor: 2.097

6.  Efficient computation of electrograms and ECGs in human whole heart simulations using a reaction-eikonal model.

Authors:  Aurel Neic; Fernando O Campos; Anton J Prassl; Steven A Niederer; Martin J Bishop; Edward J Vigmond; Gernot Plank
Journal:  J Comput Phys       Date:  2017-10-01       Impact factor: 3.553

7.  Patient-specific modeling of left ventricular electromechanics as a driver for haemodynamic analysis.

Authors:  Christoph M Augustin; Andrew Crozier; Aurel Neic; Anton J Prassl; Elias Karabelas; Tiago Ferreira da Silva; Joao F Fernandes; Fernando Campos; Titus Kuehne; Gernot Plank
Journal:  Europace       Date:  2016-12       Impact factor: 5.214

8.  Anatomically accurate high resolution modeling of human whole heart electromechanics: A strongly scalable algebraic multigrid solver method for nonlinear deformation.

Authors:  Christoph M Augustin; Aurel Neic; Manfred Liebmann; Anton J Prassl; Steven A Niederer; Gundolf Haase; Gernot Plank
Journal:  J Comput Phys       Date:  2016-01-15       Impact factor: 3.553

9.  Patient-Specific Models of Cardiac Biomechanics.

Authors:  Adarsh Krishnamurthy; Christopher T Villongco; Joyce Chuang; Lawrence R Frank; Vishal Nigam; Ernest Belezzuoli; Paul Stark; David E Krummen; Sanjiv Narayan; Jeffrey H Omens; Andrew D McCulloch; Roy Cp Kerckhoffs
Journal:  J Comput Phys       Date:  2013-07-01       Impact factor: 3.553

10.  Verification of cardiac mechanics software: benchmark problems and solutions for testing active and passive material behaviour.

Authors:  Sander Land; Viatcheslav Gurev; Sander Arens; Christoph M Augustin; Lukas Baron; Robert Blake; Chris Bradley; Sebastian Castro; Andrew Crozier; Marco Favino; Thomas E Fastl; Thomas Fritz; Hao Gao; Alessio Gizzi; Boyce E Griffith; Daniel E Hurtado; Rolf Krause; Xiaoyu Luo; Martyn P Nash; Simone Pezzuto; Gernot Plank; Simone Rossi; Daniel Ruprecht; Gunnar Seemann; Nicolas P Smith; Joakim Sundnes; J Jeremy Rice; Natalia Trayanova; Dafang Wang; Zhinuo Jenny Wang; Steven A Niederer
Journal:  Proc Math Phys Eng Sci       Date:  2015-12-08       Impact factor: 2.704

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  9 in total

1.  Automating image-based mesh generation and manipulation tasks in cardiac modeling workflows using Meshtool.

Authors:  Aurel Neic; Matthias A F Gsell; Elias Karabelas; Anton J Prassl; Gernot Plank
Journal:  SoftwareX       Date:  2020-03-20

2.  Global Sensitivity Analysis of Four Chamber Heart Hemodynamics Using Surrogate Models.

Authors:  Elias Karabelas; Stefano Longobardi; Jana Fuchsberger; Orod Razeghi; Cristobal Rodero; Marina Strocchi; Ronak Rajani; Gundolf Haase; Gernot Plank; Steven Niederer
Journal:  IEEE Trans Biomed Eng       Date:  2022-09-19       Impact factor: 4.756

3.  An accurate, robust, and efficient finite element framework with applications to anisotropic, nearly and fully incompressible elasticity.

Authors:  Elias Karabelas; Matthias A F Gsell; Gundolf Haase; Gernot Plank; Christoph M Augustin
Journal:  Comput Methods Appl Mech Eng       Date:  2022-03-31       Impact factor: 6.756

4.  Robust and efficient fixed-point algorithm for the inverse elastostatic problem to identify myocardial passive material parameters and the unloaded reference configuration.

Authors:  Laura Marx; Justyna A Niestrawska; Matthias A F Gsell; Federica Caforio; Gernot Plank; Christoph M Augustin
Journal:  J Comput Phys       Date:  2022-08       Impact factor: 4.645

5.  A computationally efficient physiologically comprehensive 3D-0D closed-loop model of the heart and circulation.

Authors:  Christoph M Augustin; Matthias A F Gsell; Elias Karabelas; Erik Willemen; Frits W Prinzen; Joost Lumens; Edward J Vigmond; Gernot Plank
Journal:  Comput Methods Appl Mech Eng       Date:  2021-08-18       Impact factor: 6.756

6.  CT-Based Simulation of Left Ventricular Hemodynamics: A Pilot Study in Mitral Regurgitation and Left Ventricle Aneurysm Patients.

Authors:  Lukas Obermeier; Katharina Vellguth; Adriano Schlief; Lennart Tautz; Jan Bruening; Christoph Knosalla; Titus Kuehne; Natalia Solowjowa; Leonid Goubergrits
Journal:  Front Cardiovasc Med       Date:  2022-03-22

7.  A coupling strategy for a first 3D-1D model of the cardiovascular system to study the effects of pulse wave propagation on cardiac function.

Authors:  Federica Caforio; Christoph M Augustin; Jordi Alastruey; Matthias A F Gsell; Gernot Plank
Journal:  Comput Mech       Date:  2022-07-09       Impact factor: 4.391

8.  Versatile stabilized finite element formulations for nearly and fully incompressible solid mechanics.

Authors:  Elias Karabelas; Gundolf Haase; Gernot Plank; Christoph M Augustin
Journal:  Comput Mech       Date:  2019-09-11       Impact factor: 4.014

9.  Image-Based Computational Hemodynamics Analysis of Systolic Obstruction in Hypertrophic Cardiomyopathy.

Authors:  Ivan Fumagalli; Piermario Vitullo; Christian Vergara; Marco Fedele; Antonio F Corno; Sonia Ippolito; Roberto Scrofani; Alfio Quarteroni
Journal:  Front Physiol       Date:  2022-01-06       Impact factor: 4.566

  9 in total

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