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Literature DB >> 2987847

Structure and function of the region of the replication origin of the Bacillus subtilis chromosome. III. Nucleotide sequence of some 10,000 base pairs in the origin region.

Abstract

Approximately 10,000 nucleotides were sequenced in the oriC region of the Bacillus subtilis chromosome. The first replicating DNA strands are hybridized with a SalI-EcoRI fragment (nucleotide #1206-2954) in one direction (left to right) and an EcoRI-PstI fragment (#2949-4233) in the other. Seven open reading frames (ORF) accompanied with Shine-Dalgarno (SD) sequences were identified. ORF638 and ORF821 were identified as gyrB and gyrA genes respectively based on genetic evidences and amino acid sequence data. Comparison of amino acid sequences revealed that ORF44, ORF446, ORF378 and ORF323 are homologous with rpmH, dnaA, dnaN and recF of Escherichia coli, respectively. Thus, the organization of the ORFs from ORF44 to ORF638 resembles the organization of genes in the rpmH-gyrB region of the E. coli chromosome. Two non-coding regions characteristic for oriC signals were found near the site of initiation of the first replicating DNA. They are composed of repeating sequences whose consensus sequence TTAT(C/A)CACA is identical to that of 4 repeating sequences in the oriC of E. coli.

Entities: Gene Species

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Year: 1985 PMID： 2987847 PMCID： PMC341153 DOI： 10.1093/nar/13.7.2251

Source DB: PubMed Journal: Nucleic Acids Res ISSN： 0305-1048 Impact factor: 16.971

14 in total

1. Structural analysis of the dnaA and dnaN genes of Escherichia coli.

Authors: H Ohmori; M Kimura; T Nagata; Y Sakakibara
Journal: Gene Date: 1984-05 Impact factor: 3.688

2. Molecular analysis of the recF gene of Escherichia coli.

Authors: M A Blanar; S J Sandler; M E Armengod; L W Ream; A J Clark
Journal: Proc Natl Acad Sci U S A Date: 1984-08 Impact factor: 11.205

3. Two RNA polymerase sigma factors from Bacillus subtilis discriminate between overlapping promoters for a developmentally regulated gene.

Authors: W C Johnson; C P Moran; R Losick
Journal: Nature Date: 1983-04-28 Impact factor: 49.962

4. The nucleotide sequence of the dnaA gene and the first part of the dnaN gene of Escherichia coli K-12.

Authors: E B Hansen; F G Hansen; K von Meyenburg
Journal: Nucleic Acids Res Date: 1982-11-25 Impact factor: 16.971

5. Replication origin of the Bacillus subtilis chromosome determined by hybridization of the first-replicating DNA with cloned fragments from the replication origin region of the chromosome.

Authors: N Ogasawara; S Mizumoto; H Yoshikawa
Journal: Gene Date: 1984-10 Impact factor: 3.688

6. Bacillus subtilis DNA gyrase: purification of subunits and reconstitution of supercoiling activity.

Authors: E Orr; W L Staudenbauer
Journal: J Bacteriol Date: 1982-07 Impact factor: 3.490

7. Identification of a suppressor sequence for DNA replication in the replication origin region of the Bacillus subtilis chromosome.

Authors: M Seiki; N Ogasawara; H Yoshikawa
Journal: Proc Natl Acad Sci U S A Date: 1982-07 Impact factor: 11.205

8. Chromosomal replication origin from the marine bacterium Vibrio harveyi functions in Escherichia coli: oriC consensus sequence.

Authors: J W Zyskind; J M Cleary; W S Brusilow; N E Harding; D W Smith
Journal: Proc Natl Acad Sci U S A Date: 1983-03 Impact factor: 11.205

9. Replication origin of the Escherichia coli K-12 chromosome: the size and structure of the minimum DNA segment carrying the information for autonomous replication.

Authors: A Oka; K Sugimoto; M Takanami; Y Hirota
Journal: Mol Gen Genet Date: 1980-04

10. The nucleotide sequence of the dnaA gene promoter and of the adjacent rpmH gene, coding for the ribosomal protein L34, of Escherichia coli.

Authors: F G Hansen; E B Hansen; T Atlung
Journal: EMBO J Date: 1982 Impact factor: 11.598

99 in total

1. Orientation of genes in the Bacillus subtilis chromosome.

Authors: D R Zeigler; D H Dean
Journal: Genetics Date: 1990-08 Impact factor: 4.562

2. Physical distance between the site of type II DNA binding to the membrane and oriC on the Bacillus subtilis 168 chromosome.

Authors: M Itaya; J J Laffan; N Sueoka
Journal: J Bacteriol Date: 1992-08 Impact factor: 3.490

3. Molecular analysis of the Bacillus subtilis recF function.

Authors: J C Alonso; A C Stiege
Journal: Mol Gen Genet Date: 1991-09

4. A functional 125-kDa core polypeptide of fission yeast DNA topoisomerase II.

Authors: K Shiozaki; M Yanagida
Journal: Mol Cell Biol Date: 1991-12 Impact factor: 4.272

5. Mutations in DNA gyrase result in novobiocin resistance in halophilic archaebacteria.

Authors: M L Holmes; M L Dyall-Smith
Journal: J Bacteriol Date: 1991-01 Impact factor: 3.490

6. Overreplication of the origin region in the dnaB37 mutant of Bacillus subtilis: postinitiation control of chromosomal replication.

Authors: G Henckes; F Harper; A Levine; F Vannier; S J Séror
Journal: Proc Natl Acad Sci U S A Date: 1989-11 Impact factor: 11.205

10. Sequence and complementation analysis of recF genes from Escherichia coli, Salmonella typhimurium, Pseudomonas putida and Bacillus subtilis: evidence for an essential phosphate binding loop.

Authors: S J Sandler; B Chackerian; J T Li; A J Clark
Journal: Nucleic Acids Res Date: 1992-02-25 Impact factor: 16.971