Literature DB >> 29870400

Topographic distribution of idiopathic pulmonary fibrosis: a hybrid physics- and agent-based model.

Tyler J Wellman1, Jarred R Mondoñedo, Gerald S Davis, Jason H T Bates, Béla Suki.   

Abstract

OBJECTIVE: Idiopathic pulmonary fibrosis (IPF) is a progressive and fatal disease characterized by excessive deposition of collagen and associated stiffening of lung tissue. While it is known that inflammation and dysfunction of fibroblasts are involved in disease development, it remains poorly understood how cells and their microenvironment interact to produce a characteristic subpleural pattern of high and low tissue density variations, called honeycombing, on CT images of patients with IPF. Since the pleura is stiffer than the parenchyma, we hypothesized that local stiffness of the underlying extracellular matrix can influence fibroblast activation and consequently the deposition of collagen, which in turn influences tissue stiffness in a positive feedback loop. APPROACH: We tested this hypothesis by developing a hybrid physics-based/agent-based computational model in which aberrant fibroblast activation is induced when cells migrate on stiff tissue. This activation then feeds back on itself via the altered mechanical environment that it creates by depositing collagen. MAIN
RESULTS: The model produces power law distributions of both low- and high-attenuation area clusters and predicts the development of honeycombing only when mechanical rupture is allowed to take place in highly strained normal tissue surrounded by stiff fibrotic tissue. These predictions compare well with histologic data computed from CT images of patients with IPF. SIGNIFICANCE: We conclude that the clinical manifestation of subpleural honeycombing in IPF may result from fibroblasts entering into a positive feedback loop induced by the abnormally high tissue stiffness near the pleura.

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Mesh:

Year:  2018        PMID: 29870400      PMCID: PMC6057779          DOI: 10.1088/1361-6579/aaca86

Source DB:  PubMed          Journal:  Physiol Meas        ISSN: 0967-3334            Impact factor:   2.833


  42 in total

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Journal:  Am J Respir Crit Care Med       Date:  2000-02       Impact factor: 21.405

2.  Mechanical interactions between collagen and proteoglycans: implications for the stability of lung tissue.

Authors:  Francisco S A Cavalcante; Satoru Ito; Kelly Brewer; Hiroaki Sakai; Adriano M Alencar; Murilo P Almeida; José S Andrade; Arnab Majumdar; Edward P Ingenito; Béla Suki
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3.  Linking parenchymal disease progression to changes in lung mechanical function by percolation.

Authors:  Jason H T Bates; Gerald S Davis; Arnab Majumdar; Kelly J Butnor; Béla Suki
Journal:  Am J Respir Crit Care Med       Date:  2007-06-15       Impact factor: 21.405

4.  Endoplasmic reticulum stress, a new wrestler, in the pathogenesis of idiopathic pulmonary fibrosis.

Authors:  Lei Zhang; Yi Wang; Nuruliarizki Shinta Pandupuspitasari; Guorao Wu; Xudong Xiang; Quan Gong; Weining Xiong; Cong-Yi Wang; Ping Yang; Boxu Ren
Journal:  Am J Transl Res       Date:  2017-02-15       Impact factor: 4.060

5.  Quantitative CT analysis of honeycombing area in idiopathic pulmonary fibrosis: Correlations with pulmonary function tests.

Authors:  Hiroaki Nakagawa; Yukihiro Nagatani; Masashi Takahashi; Emiko Ogawa; Nguyen Van Tho; Yasushi Ryujin; Taishi Nagao; Yasutaka Nakano
Journal:  Eur J Radiol       Date:  2015-11-07       Impact factor: 3.528

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Authors:  Aleksandar Marinković; Fei Liu; Daniel J Tschumperlin
Journal:  Am J Respir Cell Mol Biol       Date:  2013-04       Impact factor: 6.914

7.  Tissue stiffness, latent TGF-beta1 activation, and mechanical signal transduction: implications for the pathogenesis and treatment of fibrosis.

Authors:  Boris Hinz
Journal:  Curr Rheumatol Rep       Date:  2009-04       Impact factor: 4.592

8.  Idiopathic pulmonary fibrosis: progression of honeycombing at thin-section CT.

Authors:  M Akira; M Sakatani; E Ueda
Journal:  Radiology       Date:  1993-12       Impact factor: 11.105

Review 9.  Toll-like receptors in the pathogenesis of pulmonary fibrosis.

Authors:  Theodoros Karampitsakos; Tony Woolard; Demosthenes Bouros; Argyris Tzouvelekis
Journal:  Eur J Pharmacol       Date:  2016-06-27       Impact factor: 4.432

10.  Fibrotic extracellular matrix activates a profibrotic positive feedback loop.

Authors:  Matthew W Parker; Daniel Rossi; Mark Peterson; Karen Smith; Kristina Sikström; Eric S White; John E Connett; Craig A Henke; Ola Larsson; Peter B Bitterman
Journal:  J Clin Invest       Date:  2014-03-03       Impact factor: 14.808

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  6 in total

1.  Multi-scale models of lung fibrosis.

Authors:  Julie Leonard-Duke; Stephanie Evans; Riley T Hannan; Thomas H Barker; Jason H T Bates; Catherine A Bonham; Bethany B Moore; Denise E Kirschner; Shayn M Peirce
Journal:  Matrix Biol       Date:  2020-05-11       Impact factor: 11.583

2.  Percolation of collagen stress in a random network model of the alveolar wall.

Authors:  Dylan T Casey; Samer Bou Jawde; Jacob Herrmann; Vitor Mori; J Matthew Mahoney; Béla Suki; Jason H T Bates
Journal:  Sci Rep       Date:  2021-08-17       Impact factor: 4.379

3.  An Analytic Model of Tissue Self-Healing and Its Network Implementation: Application to Fibrosis and Aging.

Authors:  Béla Suki; Jacob Herrmann; Jason H T Bates
Journal:  Front Physiol       Date:  2020-10-29       Impact factor: 4.566

4.  Pathologic Proteolytic Processing of N-Cadherin as a Marker of Human Fibrotic Disease.

Authors:  Paul Durham Ferrell; Kristianne Michelle Oristian; Everett Cockrell; Salvatore Vincent Pizzo
Journal:  Cells       Date:  2022-01-04       Impact factor: 6.600

5.  ECM Mechanoregulation in Malignant Pleural Mesothelioma.

Authors:  Valeria Panzetta; Ida Musella; Sabato Fusco; Paolo A Netti
Journal:  Front Bioeng Biotechnol       Date:  2022-02-14

Review 6.  Mesothelial to mesenchyme transition as a major developmental and pathological player in trunk organs and their cavities.

Authors:  Tim Koopmans; Yuval Rinkevich
Journal:  Commun Biol       Date:  2018-10-16
  6 in total

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