Literature DB >> 29867215

Structural transitions of F-actin upon ATP hydrolysis at near-atomic resolution revealed by cryo-EM.

Felipe Merino1, Sabrina Pospich1, Johanna Funk2, Thorsten Wagner1, Florian Küllmer3, Hans-Dieter Arndt3, Peter Bieling2, Stefan Raunser4.   

Abstract

The function of actin is coupled to the nucleotide bound to its active site. ATP hydrolysis is activated during polymerization; a delay between hydrolysis and inorganic phosphate (Pi) release results in a gradient of ATP, ADP-Pi and ADP along actin filaments (F-actin). Actin-binding proteins can recognize F-actin's nucleotide state, using it as a local 'age' tag. The underlying mechanism is complex and poorly understood. Here we report six high-resolution cryo-EM structures of F-actin from rabbit skeletal muscle in different nucleotide states. The structures reveal that actin polymerization repositions the proposed catalytic base, His161, closer to the γ-phosphate. Nucleotide hydrolysis and Pi release modulate the conformational ensemble at the periphery of the filament, thus resulting in open and closed states, which can be sensed by coronin-1B. The drug-like toxin jasplakinolide locks F-actin in an open state. Our results demonstrate in detail how ATP hydrolysis links to F-actin's conformational dynamics and protein interaction.

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Year:  2018        PMID: 29867215     DOI: 10.1038/s41594-018-0074-0

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  61 in total

1.  Nucleotide-dependent conformational changes in the actin filament: Subtler than expected.

Authors:  Roberto Dominguez
Journal:  Proc Natl Acad Sci U S A       Date:  2019-02-19       Impact factor: 11.205

2.  Insights into Actin Polymerization and Nucleation Using a Coarse-Grained Model.

Authors:  Brandon G Horan; Aaron R Hall; Dimitrios Vavylonis
Journal:  Biophys J       Date:  2020-07-08       Impact factor: 4.033

Review 3.  Polymerization and depolymerization of actin with nucleotide states at filament ends.

Authors:  Ikuko Fujiwara; Shuichi Takeda; Toshiro Oda; Hajime Honda; Akihiro Narita; Yuichiro Maéda
Journal:  Biophys Rev       Date:  2018-11-20

4.  Oxidative hotspots on actin promote skeletal muscle weakness in rheumatoid arthritis.

Authors:  Maarten M Steinz; Malin Persson; Bejan Aresh; Karl Olsson; Arthur J Cheng; Emma Ahlstrand; Mats Lilja; Tommy R Lundberg; Eric Rullman; Kristina Ängeby Möller; Katalin Sandor; Sofia Ajeganova; Takashi Yamada; Nicole Beard; Björn Cg Karlsson; Pasi Tavi; Ellinor Kenne; Camilla I Svensson; Dilson E Rassier; Roger Karlsson; Ran Friedman; Thomas Gustafsson; Johanna T Lanner
Journal:  JCI Insight       Date:  2019-03-28

5.  How Protein Filaments Treadmill.

Authors:  José M Andreu
Journal:  Biophys J       Date:  2020-07-17       Impact factor: 4.033

6.  Structural basis for polarized elongation of actin filaments.

Authors:  Vilmos Zsolnay; Harshwardhan H Katkar; Steven Z Chou; Thomas D Pollard; Gregory A Voth
Journal:  Proc Natl Acad Sci U S A       Date:  2020-11-16       Impact factor: 11.205

7.  Effects of Nucleotide and End-Dependent Actin Conformations on Polymerization.

Authors:  Lauren Jepsen; David Sept
Journal:  Biophys J       Date:  2020-09-28       Impact factor: 4.033

8.  A Unified Model for Treadmilling and Nucleation of Single-Stranded FtsZ Protofilaments.

Authors:  Lauren C Corbin; Harold P Erickson
Journal:  Biophys J       Date:  2020-07-17       Impact factor: 4.033

9.  D-loop Dynamics and Near-Atomic-Resolution Cryo-EM Structure of Phalloidin-Bound F-Actin.

Authors:  Sanchaita Das; Peng Ge; Zeynep A Oztug Durer; Elena E Grintsevich; Z Hong Zhou; Emil Reisler
Journal:  Structure       Date:  2020-04-28       Impact factor: 5.006

10.  Mightier Than Muscle: A Near-Atomic View of Pollen Actin Filaments.

Authors:  Kathleen L Farquharson
Journal:  Plant Cell       Date:  2019-10-30       Impact factor: 11.277

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