Literature DB >> 30460458

Polymerization and depolymerization of actin with nucleotide states at filament ends.

Ikuko Fujiwara1, Shuichi Takeda2, Toshiro Oda3, Hajime Honda4, Akihiro Narita5, Yuichiro Maéda5,6.   

Abstract

Polymerization induces hydrolysis of ATP bound to actin, followed by γ-phosphate release, which helps advance the disassembly of actin filaments into ADP-G-actin. Mechanical understanding of this correlation between actin assembly and ATP hydrolysis has been an object of intensive studies in biochemistry and structural biology for many decades. Although actin polymerization and depolymerization occur only at either the barbed or pointed ends and the kinetic and equilibrium properties are substantially different from each other, characterizing their properties is difficult to do by bulk assays, as these assays report the average of all actin filaments in solution and are therefore not able to discern the properties of individual actin filaments. Biochemical studies of actin polymerization and hydrolysis were hampered by these inherent properties of actin filaments. Total internal reflection fluorescence (TIRF) microscopy overcame this problem by observing single actin filaments. With TIRF, we now know not only that each end has distinct properties, but also that the rate of γ-phosphate release is much faster from the terminals than from the interior of actin filaments. The rate of γ-phosphate release from actin filament ends is even more accelerated when latrunculin A is bound. These findings highlight the importance of resolving structural differences between actin molecules in the interior of the filament and those at either filament end. This review provides a history of observing actin filaments under light microscopy, an overview of dynamic properties of ATP hydrolysis at the end of actin filament, and structural views of γ-phosphate release.

Entities:  

Keywords:  ATP hydrolysis; Phosphate (Pi) release; Single actin filament observation; TIRF

Year:  2018        PMID: 30460458      PMCID: PMC6297080          DOI: 10.1007/s12551-018-0483-7

Source DB:  PubMed          Journal:  Biophys Rev        ISSN: 1867-2450


  41 in total

1.  Hydrolysis of ATP by polymerized actin depends on the bound divalent cation but not profilin.

Authors:  Laurent Blanchoin; Thomas D Pollard
Journal:  Biochemistry       Date:  2002-01-15       Impact factor: 3.162

2.  Direct real-time observation of actin filament branching mediated by Arp2/3 complex using total internal reflection fluorescence microscopy.

Authors:  K J Amann; T D Pollard
Journal:  Proc Natl Acad Sci U S A       Date:  2001-12-11       Impact factor: 11.205

3.  Investigating a back door mechanism of actin phosphate release by steered molecular dynamics.

Authors:  W Wriggers; K Schulten
Journal:  Proteins       Date:  1999-05-01

4.  Microscopic analysis of polymerization dynamics with individual actin filaments.

Authors:  Ikuko Fujiwara; Shin Takahashi; Hisashi Tadakuma; Takashi Funatsu; Shin'ichi Ishiwata
Journal:  Nat Cell Biol       Date:  2002-09       Impact factor: 28.824

5.  Head to tail polymerization of actin.

Authors:  A Wegner
Journal:  J Mol Biol       Date:  1976-11       Impact factor: 5.469

6.  Real-time measurements of actin filament polymerization by total internal reflection fluorescence microscopy.

Authors:  Jeffrey R Kuhn; Thomas D Pollard
Journal:  Biophys J       Date:  2004-11-19       Impact factor: 4.033

7.  The crystal structure of uncomplexed actin in the ADP state.

Authors:  L R Otterbein; P Graceffa; R Dominguez
Journal:  Science       Date:  2001-07-27       Impact factor: 47.728

8.  Mechanism of interaction of Acanthamoeba actophorin (ADF/Cofilin) with actin filaments.

Authors:  L Blanchoin; T D Pollard
Journal:  J Biol Chem       Date:  1999-05-28       Impact factor: 5.157

9.  Insertional assembly of actin filament barbed ends in association with formins produces piconewton forces.

Authors:  David R Kovar; Thomas D Pollard
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-17       Impact factor: 11.205

10.  Crystal structure of monomeric actin in the ATP state. Structural basis of nucleotide-dependent actin dynamics.

Authors:  Philip Graceffa; Roberto Dominguez
Journal:  J Biol Chem       Date:  2003-06-17       Impact factor: 5.157

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  5 in total

1.  Watching microtubules grow one tubulin at a time.

Authors:  Nikita Gudimchuk; Antonina Roll-Mecak
Journal:  Proc Natl Acad Sci U S A       Date:  2019-03-25       Impact factor: 11.205

Review 2.  The oligodendrocyte growth cone and its actin cytoskeleton: A fundamental element for progenitor cell migration and CNS myelination.

Authors:  Elizabeth J Thomason; Miguel Escalante; Donna J Osterhout; Babette Fuss
Journal:  Glia       Date:  2019-11-07       Impact factor: 7.452

3.  Crystal structure of human V-1 in the apo form.

Authors:  Shuichi Takeda; Ryotaro Koike; Takayuki Nagae; Ikuko Fujiwara; Akihiro Narita; Yuichiro Maéda; Motonori Ota
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2021-01-01       Impact factor: 1.056

4.  Myopathy-Sensitive G-Actin Segment 227-235 Is Involved in Salt-Induced Stabilization of Contacts within the Actin Filament.

Authors:  Joanna Gruszczynska-Biegala; Andrzej Stefan; Andrzej A Kasprzak; Piotr Dobryszycki; Sofia Khaitlina; Hanna Strzelecka-Gołaszewska
Journal:  Int J Mol Sci       Date:  2021-02-26       Impact factor: 5.923

5.  D-Loop Mutation G42A/G46A Decreases Actin Dynamics.

Authors:  Mizuki Matsuzaki; Ikuko Fujiwara; Sae Kashima; Tomoharu Matsumoto; Toshiro Oda; Masahito Hayashi; Kayo Maeda; Kingo Takiguchi; Yuichiro Maéda; Akihiro Narita
Journal:  Biomolecules       Date:  2020-05-08
  5 in total

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