Literature DB >> 29854240

A Scalable Privacy-preserving Data Generation Methodology for Exploratory Analysis.

Jaideep Vaidya1, Basit Shafiq2, Muazzam Asani2, Nabil Adam1, Xiaoqian Jiang3, Lucila Ohno-Machado3.   

Abstract

Big data coupled with precision medicine has the potential to significantly improve our understanding and treatment of complex disorders, such as cancer, diabetes, depression, etc. However, the essential problem is that data are stuck in silos, and it is difficult to precisely identify which data would be relevant and useful for any particular type of analysis. While the process to acquire and access biomedical data requires significant effort, in many cases the data may not provide much insight to the problem at hand. Therefore, there is a need to be able to measure the utility/relevance of additional datasets for a particular biomedical research task without direct access to the data. Towards this, in this paper, we develop a privacy-preserving approach to create synthetic data that can provide a firstorder approximation of utility. We evaluate the proposed approach with several biomedical datasets in the context of regression and classification tasks and discuss how it can be incorporated into existing data management systems such as REDCap.

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Mesh:

Year:  2018        PMID: 29854240      PMCID: PMC5977652     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  9 in total

1.  iDASH: integrating data for analysis, anonymization, and sharing.

Authors:  Lucila Ohno-Machado; Vineet Bafna; Aziz A Boxwala; Brian E Chapman; Wendy W Chapman; Kamalika Chaudhuri; Michele E Day; Claudiu Farcas; Nathaniel D Heintzman; Xiaoqian Jiang; Hyeoneui Kim; Jihoon Kim; Michael E Matheny; Frederic S Resnic; Staal A Vinterbo
Journal:  J Am Med Inform Assoc       Date:  2011-11-10       Impact factor: 4.497

2.  Research electronic data capture (REDCap)--a metadata-driven methodology and workflow process for providing translational research informatics support.

Authors:  Paul A Harris; Robert Taylor; Robert Thielke; Jonathon Payne; Nathaniel Gonzalez; Jose G Conde
Journal:  J Biomed Inform       Date:  2008-09-30       Impact factor: 6.317

3.  WebGLORE: a web service for Grid LOgistic REgression.

Authors:  Wenchao Jiang; Pinghao Li; Shuang Wang; Yuan Wu; Meng Xue; Lucila Ohno-Machado; Xiaoqian Jiang
Journal:  Bioinformatics       Date:  2013-09-25       Impact factor: 6.937

4.  WebDISCO: a web service for distributed cox model learning without patient-level data sharing.

Authors:  Chia-Lun Lu; Shuang Wang; Zhanglong Ji; Yuan Wu; Li Xiong; Xiaoqian Jiang; Lucila Ohno-Machado
Journal:  J Am Med Inform Assoc       Date:  2015-07-09       Impact factor: 4.497

5.  Multisurface method of pattern separation for medical diagnosis applied to breast cytology.

Authors:  W H Wolberg; O L Mangasarian
Journal:  Proc Natl Acad Sci U S A       Date:  1990-12       Impact factor: 11.205

6.  Accurate telemonitoring of Parkinson's disease progression by noninvasive speech tests.

Authors:  Athanasios Tsanas; Max A Little; Patrick E McSharry; Lorraine O Ramig
Journal:  IEEE Trans Biomed Eng       Date:  2009-11-20       Impact factor: 4.538

7.  A collaborative framework for Distributed Privacy-Preserving Support Vector Machine learning.

Authors:  Jialan Que; Xiaoqian Jiang; Lucila Ohno-Machado
Journal:  AMIA Annu Symp Proc       Date:  2012-11-03

8.  Development of a web service for analysis in a distributed network.

Authors:  Xiaoqian Jiang; Yuan Wu; Keith Marsolo; Lucila Ohno-Machado
Journal:  EGEMS (Wash DC)       Date:  2014-12-26

9.  Impact of HbA1c measurement on hospital readmission rates: analysis of 70,000 clinical database patient records.

Authors:  Beata Strack; Jonathan P DeShazo; Chris Gennings; Juan L Olmo; Sebastian Ventura; Krzysztof J Cios; John N Clore
Journal:  Biomed Res Int       Date:  2014-04-03       Impact factor: 3.411

  9 in total

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