Literature DB >> 29852072

Editing the Epigenome: Reshaping the Genomic Landscape.

Liad Holtzman1, Charles A Gersbach1,2.   

Abstract

The eukaryotic epigenome has an instrumental role in determining and maintaining cell identity and function. Epigenetic components such as DNA methylation, histone tail modifications, chromatin accessibility, and DNA architecture are tightly correlated with central cellular processes, while their dysregulation manifests in aberrant gene expression and disease. The ability to specifically edit the epigenome holds the promise of enhancing understanding of how epigenetic modifications function and enabling manipulation of cell phenotype for research or therapeutic purposes. Genome engineering technologies use highly specific DNA-targeting tools to precisely deposit epigenetic changes in a locus-specific manner, creating diverse epigenome editing platforms. This review summarizes these technologies and insights from recent studies, describes the complex relationship between epigenetic components and gene regulation, and highlights caveats and promises of the emerging field of epigenome editing, including applications for translational purposes, such as epigenetic therapy and regenerative medicine.

Keywords:  CRISPR; DNA binding; chromatin; epigenetic therapy; epigenetics; epigenome editing; epigenomics; gene regulation; gene therapy

Mesh:

Year:  2018        PMID: 29852072     DOI: 10.1146/annurev-genom-083117-021632

Source DB:  PubMed          Journal:  Annu Rev Genomics Hum Genet        ISSN: 1527-8204            Impact factor:   8.929


  33 in total

Review 1.  CRISPR technologies for precise epigenome editing.

Authors:  Muneaki Nakamura; Yuchen Gao; Antonia A Dominguez; Lei S Qi
Journal:  Nat Cell Biol       Date:  2021-01-08       Impact factor: 28.824

2.  Downregulation of SNCA Expression by Targeted Editing of DNA Methylation: A Potential Strategy for Precision Therapy in PD.

Authors:  Boris Kantor; Lidia Tagliafierro; Jeffrey Gu; Madison E Zamora; Ekaterina Ilich; Carole Grenier; Zhiqing Y Huang; Susan Murphy; Ornit Chiba-Falek
Journal:  Mol Ther       Date:  2018-08-29       Impact factor: 11.454

Review 3.  Active turnover of DNA methylation during cell fate decisions.

Authors:  Aled Parry; Steffen Rulands; Wolf Reik
Journal:  Nat Rev Genet       Date:  2020-10-06       Impact factor: 53.242

4.  Lentiviral Vector Platform for the Efficient Delivery of Epigenome-editing Tools into Human Induced Pluripotent Stem Cell-derived Disease Models.

Authors:  Lidia Tagliafierro; Ekaterina Ilich; Malik Moncalvo; Jeffrey Gu; Ahila Sriskanda; Carole Grenier; Susan K Murphy; Ornit Chiba-Falek; Boris Kantor
Journal:  J Vis Exp       Date:  2019-03-29       Impact factor: 1.355

Review 5.  A new era in functional genomics screens.

Authors:  Laralynne Przybyla; Luke A Gilbert
Journal:  Nat Rev Genet       Date:  2021-09-20       Impact factor: 53.242

Review 6.  Neurobiological functions of transcriptional enhancers.

Authors:  Alex S Nord; Anne E West
Journal:  Nat Neurosci       Date:  2019-11-18       Impact factor: 24.884

7.  Genome-wide programmable transcriptional memory by CRISPR-based epigenome editing.

Authors:  James K Nuñez; Jin Chen; Greg C Pommier; J Zachery Cogan; Joseph M Replogle; Carmen Adriaens; Gokul N Ramadoss; Quanming Shi; King L Hung; Avi J Samelson; Angela N Pogson; James Y S Kim; Amanda Chung; Manuel D Leonetti; Howard Y Chang; Martin Kampmann; Bradley E Bernstein; Volker Hovestadt; Luke A Gilbert; Jonathan S Weissman
Journal:  Cell       Date:  2021-04-09       Impact factor: 41.582

Review 8.  Genome and base editing for genetic hearing loss.

Authors:  Philipp Niggemann; Bence György; Zheng-Yi Chen
Journal:  Hear Res       Date:  2020-04-05       Impact factor: 3.208

Review 9.  (Epi)Genetic Mechanisms Underlying the Evolutionary Success of Eusocial Insects.

Authors:  Kayli R Sieber; Taylor Dorman; Nicholas Newell; Hua Yan
Journal:  Insects       Date:  2021-05-27       Impact factor: 2.769

Review 10.  Epigenetic and metabolic regulation of epidermal homeostasis.

Authors:  Roland N Wagner; Josefina Piñón Hofbauer; Verena Wally; Barbara Kofler; Matthias Schmuth; Laura De Rosa; Michele De Luca; Johann W Bauer
Journal:  Exp Dermatol       Date:  2021-03-10       Impact factor: 3.960

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.