Literature DB >> 29850753

Achieving biopolymer synergy in systems chemistry.

Yushi Bai1, Agata Chotera, Olga Taran, Chen Liang, Gonen Ashkenasy, David G Lynn.   

Abstract

Synthetic and materials chemistry initiatives have enabled the translation of the macromolecular functions of biology into synthetic frameworks. These explorations into alternative chemistries of life attempt to capture the versatile functionality and adaptability of biopolymers in new orthogonal scaffolds. Information storage and transfer, however, so beautifully represented in the central dogma of biology, require multiple components functioning synergistically. Over a single decade, the emerging field of systems chemistry has begun to catalyze the construction of mutualistic biopolymer networks, and this review begins with the foundational small-molecule-based dynamic chemical networks and peptide amyloid-based dynamic physical networks on which this effort builds. The approach both contextualizes the versatile approaches that have been developed to enrich chemical information in synthetic networks and highlights the properties of amyloids as potential alternative genetic elements. The successful integration of both chemical and physical networks through β-sheet assisted replication processes further informs the synergistic potential of these networks. Inspired by the cooperative synergies of nucleic acids and proteins in biology, synthetic nucleic-acid-peptide chimeras are now being explored to extend their informational content. With our growing range of synthetic capabilities, structural analyses, and simulation technologies, this foundation is radically extending the structural space that might cross the Darwinian threshold for the origins of life as well as creating an array of alternative systems capable of achieving the progressive growth of novel informational materials.

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Year:  2018        PMID: 29850753     DOI: 10.1039/c8cs00174j

Source DB:  PubMed          Journal:  Chem Soc Rev        ISSN: 0306-0012            Impact factor:   54.564


  8 in total

1.  Primitive selection of the fittest emerging through functional synergy in nucleopeptide networks.

Authors:  Anil Kumar Bandela; Nathaniel Wagner; Hava Sadihov; Sara Morales-Reina; Agata Chotera-Ouda; Kingshuk Basu; Rivka Cohen-Luria; Andrés de la Escosura; Gonen Ashkenasy
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-02       Impact factor: 11.205

2.  Conformationally engineering flexible peptides on silver nanoparticles.

Authors:  Jia Xu; Tiange Gao; Lingjie Sheng; Yan Wang; Chenxi Lou; Haifang Wang; Yuanfang Liu; Aoneng Cao
Journal:  iScience       Date:  2022-05-04

3.  Triggered reversible substitution of adaptive constitutional dynamic networks dictates programmed catalytic functions.

Authors:  Liang Yue; Shan Wang; Itamar Willner
Journal:  Sci Adv       Date:  2019-05-10       Impact factor: 14.136

4.  The Informational Substrate of Chemical Evolution: Implications for Abiogenesis.

Authors:  Andrés de la Escosura
Journal:  Life (Basel)       Date:  2019-08-08

5.  Integration of photocatalytic and dark-operating catalytic biomimetic transformations through DNA-based constitutional dynamic networks.

Authors:  Chen Wang; Michael P O'Hagan; Ehud Neumann; Rachel Nechushtai; Itamar Willner
Journal:  Nat Commun       Date:  2021-07-09       Impact factor: 14.919

6.  Folding, Assembly, and Persistence: The Essential Nature and Origins of Biopolymers.

Authors:  Calvin M Runnels; Kathryn A Lanier; Justin Krish Williams; Jessica C Bowman; Anton S Petrov; Nicholas V Hud; Loren Dean Williams
Journal:  J Mol Evol       Date:  2018-11-19       Impact factor: 2.395

7.  The Essence of Systems Chemistry.

Authors:  Peter Strazewski
Journal:  Life (Basel)       Date:  2019-07-11

8.  Discovery of phosphotyrosine-binding oligopeptides with supramolecular target selectivity.

Authors:  Ana S Pina; Leonor Morgado; Krystyna L Duncan; Sara Carvalho; Henrique F Carvalho; Arménio J M Barbosa; Beatriz de P Mariz; Inês P Moreira; Daniela Kalafatovic; Bruno M Morais Faustino; Vishal Narang; Tong Wang; Charalampos G Pappas; Isabel Ferreira; A Cecília A Roque; Rein V Ulijn
Journal:  Chem Sci       Date:  2021-12-07       Impact factor: 9.825

  8 in total

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