| Literature DB >> 29849983 |
Maryam Khaleghizadeh1,2, Mohammad Mahdi Forghanifard3, Abolfazl Rad4, Moein Farshchian2, Zahra Hejazi1, Mehran Gholamin2, Bahram Memar5, Mohammad Reza Abbaszadegan2,6.
Abstract
BACKGROUND: Cancer/Testis Antigens (CTAs) are a sub-group of tumor-associated antigens which are expressed normally in germ line cells and trophoblast, and aberrantly in a variety of malignancies. One of the most important CTAs is Developmental Pluripotency Associated-2(DPPA2) with unknown biological function. Considering the importance of DPPA2 in developmental events and cancer, preparing a suitable platform to analyze DPPA2 roles in the cells seems to be necessary.Entities:
Keywords: Carcinogenesis; Esophageal squamous cell carcinoma; Germ cells; Testis
Year: 2018 PMID: 29849983 PMCID: PMC5960063
Source DB: PubMed Journal: Avicenna J Med Biotechnol ISSN: 2008-2835
Real time primer set (1), Cloning primer set (2)
| 5′-AGAAATACAATCCAGGTCATCTACTTC-3′ | |
| 5′-GCATATCTTGCCGTTGTTCAGG-3′ | |
| 5′-TTTTGGATCCCAGGGTGTTGCT-3′ | |
| 5′-TTTTCTCGAGGTTGCTGCTACTTC-3′ |
Primers for retrovectors’ titration by qPCR
| Gag forward | GGAGCTAGAACGATTCGCAGTTA | |
| Gag reverse | GGTGTAGCTGTCCCAGTATTTGTC | |
| Alb forward | GCTGTCATCTCTTGTGGGCTGT | |
| Alb reverse | ACTCATGGGAGCTGCTGGTTC | |
Figure 1.PCR amplification of DPPA2. PCR product was 941 bp long as expected when visualized on agarose gel.
Figure 2.Recombinant pTZ57R/TDPPA2 digested with BamHI and XhoI. Digestion of recombinant pTZ57R/TDPPA2 gives 2 bands that correspond to pTZ57R/T vector (2886 bp) and DPPA2 gene (941 bp).
Figure 3.Sub cloning of DPPA2 gene in pRUF expression vector, A. Negative control plate; B. Sub cloning plate of DPPA2 gene; C. Colony PCR for confirming recombinant colonies, D. The size of pRUF vector was increased to 6891 bp after insertion of DPPA2 gene, E. Digestion of recombinant pRUF-DPPA2 plasmid by BamHI and XhoI gives 2 bands that correspond to pRUF expression vector (5950 bp) and DPPA2 gene (941 bp).
Figure 4.pRUF Retroviral Vector Map. This image was kindly provided by Paul Moretti, Hanson Institute, SA, Australia, http://www.hansoninstitute.sa.gov.au/
Figure 5A–C.GFP expression in target cells 48 hr after transfection (×100) that were representative fluorescent photographs of HEK293T and GP293, respectively, under fluorescent microscope. 6C was representative fluorescent photograph of target cell (KYSE-30) that was transducted by enriched recombinant viral particles.
Figure 6.Titer estimation of retroviral vector using real-time RT-PCR. Serial dilutions of pAlb vector were prepared. A) Amplification plot of samples with each dilution was represented in order from left to right on the graph. B) Standard curve generated from amplification plot is shown in A. Each sample was performed in duplicate and is represented as a dot. Overlapping dots are present in most of the dilutions illustrating the tight correlation within each dilution. Correlation coefficient for Alb and Gag was 103.3 and 99.5%, respectively.