Robert C Dunbar1, Jonathan Martens2, Giel Berden2, Jos Oomens2,3. 1. Chemistry Department , Case Western Reserve University , Cleveland , Ohio 44106 , United States. 2. Radboud University, Institute for Molecules and Materials , FELIX Laboratory , Toernooiveld 7c , 6525ED Nijmegen , The Netherlands. 3. University of Amsterdam , Science Park 904 , 1098XH Amsterdam , The Netherlands.
Abstract
Chelation complexes of the histidine-containing tripeptides HisAlaAla, AlaHisAla, and AlaAlaHis with Ni(II) and Cu(II) having a -1 net charge are characterized in the gas phase by infrared multiple-photon dissociation (IRMPD) spectroscopy and density functional theory calculations. We address the question of whether the gas-phase complexes carry over characteristics from the corresponding condensed-phase species. We focus particularly on three aspects of their structure: (i) square-planar chelation by the deprotonated amide nitrogens around the metal ion (low-spin for the Ni case), (ii) metal-ion coordination of the imidazole side chain nitrogen, and (iii) the exceptional preference for metal-ion chelation by peptides with His in the third position from the N-terminus, as in the amino terminal Cu and Ni (ATCUN) motif. We find that square-planar binding around the metal ion, involving bonds to both deprotonated backbone nitrogens, one of the carboxylate oxygens and the N-terminal nitrogen, is the dominant binding motif for all three isomers. In contrast to the condensed-phase behavior, the dominant mode of binding for all three isomers does not involve the imidazole side chain, which is instead placed outside the coordination zone. Only for the AlaAlaHis isomer, the imidazole-bound structure is also detected as a minority population, as identified from a distinctive short-wavelength IR absorption. The observation that this conformation exists only for AlaAlaHis correlates with condensed-phase behavior at neutral-to-basic pH, in the sense that the isomer with His in the third position is exceptionally disposed to metal ion chelation by four nitrogen atoms (4N) when compared with the other isomers. These results also emphasize the divergence between the conformational stabilities in the gas phase and in solution or crystalline environments: in the gas phase, direct metal binding of the imidazole is overall less favorable than the alternative of a remote imidazole that can act as an intramolecular H-bond donor enhancing the gas-phase stability.
Chelation complexes of the histidine-containing tripeptidesHisAlaAla, AlaHisAla, and AlaAlaHis with Ni(II) and Cu(II) having a -1 net charge are characterized in the gas phase by infrared multiple-photon dissociation (IRMPD) spectroscopy and density functional theory calculations. We address the question of whether the gas-phase complexes carry over characteristics from the corresponding condensed-phase species. We focus particularly on three aspects of their structure: (i) square-planar chelation by the deprotonated amidenitrogens around the metal ion (low-spin for the Ni case), (ii) metal-ion coordination of the imidazole side chain nitrogen, and (iii) the exceptional preference for metal-ion chelation by peptides with His in the third position from the N-terminus, as in the amino terminal Cu and Ni (ATCUN) motif. We find that square-planar binding around the metal ion, involving bonds to both deprotonated backbone nitrogens, one of the carboxylateoxygens and the N-terminal nitrogen, is the dominant binding motif for all three isomers. In contrast to the condensed-phase behavior, the dominant mode of binding for all three isomers does not involve the imidazole side chain, which is instead placed outside the coordination zone. Only for the AlaAlaHis isomer, the imidazole-bound structure is also detected as a minority population, as identified from a distinctive short-wavelength IR absorption. The observation that this conformation exists only for AlaAlaHis correlates with condensed-phase behavior at neutral-to-basic pH, in the sense that the isomer with His in the third position is exceptionally disposed to metal ion chelation by four nitrogen atoms (4N) when compared with the other isomers. These results also emphasize the divergence between the conformational stabilities in the gas phase and in solution or crystalline environments: in the gas phase, direct metal binding of the imidazole is overall less favorable than the alternative of a remote imidazole that can act as an intramolecular H-bond donor enhancing the gas-phase stability.
A principal question
in the binding of metal ions to histidine-containing
peptides is whether the binding does or does not involve direct metal-to-imidazole
bonding. It is generally thought that the binding of copper, in particular
in proteins, is largely related to histidine residues.[1] Indeed, the binding of both Ni(II) and Cu(II) with histidine-containing
peptides in the condensed phase is often (although not necessarily)
associated with metal coordination to the imidazole side chain. It
is of interest to consider whether the presence of histidine in gas-phase peptides also favors coordination to the imidazole
moiety and, to the extent that this is the case, what the favorable
configurations are.For the condensed phases, there is extensive
literature describing
the binding of divalent transition metal ions to peptides and the
successive degrees of deprotonation of the backbone amidenitrogens
with concomitant binding of these sites to the metal ion, progressing
as a function of increasing pH.[2−10] The ability in electrospray ionization mass spectrometry (ESI-MS)
to access corresponding gas-phase metal- ion–peptide complexes
by explicit deprotonation at each chosen step along this progression—by
MS selection of a specific charge state of the complex—enables
us to investigate these systems in complete isolation. This is of
interest because complexation is not encumbered by interactions with
solvent molecules or a protein matrix. In the gas phase, the stage
of triply deprotonated ligands complexed to divalent metal ions corresponds
to an overall monoanionic species. For tripeptide ligands, these monoanionic
complexes involve nearly obligatory deprotonation and metal-ion binding
of the two amidenitrogens. Since this degree of backbone deprotonation
is also normal for condensed-phase peptide complexation by Ni(II)
and Cu(II), the present study of complexes in the monoanion charge
state gives a particularly apt set of comparisons between condensed-phase
and gas-phase structural features. The purpose is to assign the structures
of the anionic gas-phase complexes and to compare these with their
condensed-phase counterparts, as well as with previously reported
nondeprotonated chelation complexes, with an overall positive charge.[11−13] The discussion will focus on comparison of two modes of binding,
differing primarily in whether the imidazole side chain is or is not
bound to the metal ion, as is exemplified in Scheme for the CuAAH complex (we shall use this
simplified notation to refer to monoanionic complexes of the [Cu2+AlaAlaHis–3H]− type throughout this
paper).
Scheme 1
Two Principal Binding Patterns Illustrated for the Anionic
Complex
of Cu(II) and AlaAlaHis
Cu(II) and Ni(II) binding patterns and geometries to monohistidine
peptides or histidine binding regions in peptides and proteins have
been widely studied in the condensed phases, generating a large body
of literature. Although we will not attempt to provide a comprehensive
review, a few representative publications can be noted.[5−8,14−23] The investigation of deprotonated peptide binding to metal ions,
in particular Cu(II), has recently been stimulated by the strong binding
that is characteristic of this ion to one or more of the four monohistidine
regions in the “octarepeat” region of the prion protein
PrP, as well as additional PrP sites outside this region.[6,7,17,24] Prion proteins and their fragments are widely discussed as providing
a variety of copper binding possibilities, including a 3N pattern
with an additional water ligand at the fourth coordination site[7] and a 4N pattern.[17,25] Other copper-binding
proteins of interest involving interaction of the metal ion with a
histidine residue include albumin,[15] Hpn
protein,[6,26] α-synuclein,[17] and the amyloid-β peptide.[7]One reason in particular for comparing spectra of all three of
the sequence isomers in this study is to investigate whether the gas
phase provides any evidence for the exceptional stability of complexes
with histidine in the third position from the N-terminus. For Cu and
Ni, such complexes have become well-known as the ATCUN (amino terminal
Cu(II)- and Ni(II)) 4N-caged structure [NNNR], which is illustrated
in Scheme and continues
to be the theme of many studies in a number of variations.[1,3,6,15,16,22,23,27−34] This pattern was originally identified in human serum albumin, but
it has been found to recur in a wide variety of proteins.[1,6,32,35] An unexpected realization from the present results is that this
4N structure is not the most favorable structure for gas-phase CuAAH
complexes. However, we show that this 4N structure does appear as
a minor contribution, whereas it does not occur at all for gas-phase
complexes with His in the first or second position.In the gas
phase, the coordination structures of the histidine
amino acid with alkali metal cations[36,37] and with Cd(II)
and Zn(II), as singly deprotonated complexes,[38] have been reported. In both Cd(II) and Zn(II) ground state complexes,
His deprotonates at the carboxyl group, and a tridentate structure
is formed involving metal ion binding at the imidazole N1 site.[38] Complexes of Cu(II) with two
His amino acid ligands have been investigated with IRMPD spectroscopy.[39] Two gas-phase studies have investigated structures
of histidine-containing dipeptide complexes, finding that iminol-type
binding for Ni(II) is preferred over charge-solvation binding.[11,40] For the dicationic (undeprotonated) complexes of HisGly with a number
of metal ions including Ni(II), the imidazolenitrogen was found to
be bound to the metal ion.[11] Similarly,
the monocationic (singly deprotonated) state of HisHis with Ca(II)
and Ni(II), showed that the metal ion is chelated by both imidazoles
along with the deprotonated amidenitrogen.[40] The anionic NiHAA– complex was posed as an example
illustrating the role of explicit deprotonation in promoting the switch
from charge-solvation binding to iminol binding.[12]In our previous report of the dicationic charge state
of the same
set of complexes,[13] attention was directed
at the question of how many of the backbone amidenitrogens were bound
to the metal ion. In the monoanionic, triply deprotonated, charge
state of interest here, this uncertainty is greatly reduced, since
only one labile proton remains and the range of choices for its location
are strongly constrained. All low-energy structures involve deprotonation
and metal-coordination of both backbone amidenitrogens, so that the
results are directly comparable to condensed-phase observations of
complexes at the stage of double backbone deprotonation (pH > 6)3.
Experiments and Calculations
Nomenclature
Coordination
of the metal ion by an amide
peptide linkage can occur through the carbonyl oxygen, which we refer
to as charge-solvation (CS), or through a deprotonated nitrogen, which
we refer to as iminol (Im). Consistent with our nomenclature for the
cationic species,[13] we use the following
naming conventions: The format is for example Im2 [NNNR] or Im1CS1
[NOOR]. The prefix denotes the number of coordinate bonds with deprotonated
amidenitrogens (Im) and with amide carbonyl oxygens (CS). All metal
coordination points are then listed in square brackets following a
fixed order: First are the deprotonated iminol amidenitrogens (N);
next are the amide carbonyl oxygens (O); next is the C-terminal carboxylate
or carboxyl oxygen (O); next is the N-terminal amino nitrogen (N);
finally, the deprotonated imidazole ring nitrogen is listed with the
symbol R.
Experimental Section
IR spectra of the gaseous metal-ion
complexes in the 1000–1800 cm–1 spectral
range were obtained using a modified quadrupole ion trap (QIT) mass
spectrometer (Bruker, Amazon Speed ETD)[41,42] coupled to
the free electron laser for infrared experiments (FELIX).Singly
charged anionic metal-ion peptide complexes of copper and nickel with
AAH, AHA, and HAA were generated by ESI from a solution containing
∼10–6 M of the peptide and metal nitrate
salt in acetonitrile/H2O (4:1). Target ions were trapped
and mass-selected before being irradiated by the wavelength-tunable
infrared light from FELIX. A mass spectrum is recorded at each wavelength
point and the extent of dissociation is determined as a yield, the
summed intensity of all fragment ions ratioed by the intensity of
all fragment plus precursor ions. The complexes showed rich IR induced
dissociation mass spectra, with the main fragments corresponding to
small neutral losses (H2O, CO2) as well as some
sequence ions. A plot of this yield as a function of laser frequency
is interpreted as the IR spectrum of the complex. DFT computed linear
IR spectra of candidate ion structures were compared with the observed
IRMPD spectra, with the calculated relative energetics providing additional
guidance, to assign conformational and tautomeric structures.
Quantum-Chemical
Calculations
All calculations were
carried out using the Gaussian09 quantum chemistry package.[43] The density functional theory (DFT) level used
for initial calculations was B3LYP/6-31+g(d,p), but energies and spectra
for all species within about 50 kJ mol–1 of the
lowest-energy structure were optimized and computed with the 6-311++g(d,p)
basis set, which never gave significant differences. Calculated electronic
energies as well as free energies with corrections for zero-point
energies and thermal and entropy effects at 300 K are given in Table with the corresponding
conformational structures displayed in Figures S1–S3 of the Supporting Information. Corrections to
the simple zero-K energies were small in most cases and made no difference
in the relative ordering of structures and hence to our interpretations.
For weakly bound neutral/neutral complexes, there has been concern
about the adequacy of B3LYP calculations to accurately determine the
contribution of dispersion to the binding energy,[44] but for ionic complexes like the present systems the binding
is so strong compared with dispersion forces that such concerns were
assumed to be insignificant.
Table 1
Relative Energies
(in kJ/mol) for
Different Complexes of Three His-Containing Tripeptides with Cu2+ and Ni2+ with an Overall 1– Chargea
peptide/conformer
Ni2+
Cu2+
AAH
Im2[NNON]a
0 (0)
0 (0)
Im2[NNON]b
2 (2)
3 (4)
Im2[NNNR]
26 (29)
13 (12)
Im2[NNON(R)]
56 (52)
Im1CS1[NOOR]
159 (153)
AHA
Im2[NNON]a
0 (0)
0 (1)
Im2[NNON]b
5 (5)
2 (0)
Im2[NNON(R)]
56 (46)
73 (69)
Im1CS1[NOOR]
74 (70)
83 (83)
HAA
Im2[NNON]a
0 (0)
0 (0)
Im2[NNON]b
2 (2)
31 (28)
Im2[NNOR]
59 (59)
36 (39)
Im1CS1[NOOR]
109 (102)
60 (68)
Im2[NNON(R)]
114 (98)
b
Values
in parentheses are free
energies (harmonic vibrations, free rotors) at 300 K.
Converges to Im2[NNON]b.
Values
in parentheses are free
energies (harmonic vibrations, free rotors) at 300 K.Converges to Im2[NNON]b.For comparison of DFT computed spectra
to IRMPD spectra, the calculated
frequencies were scaled by a factor of 0.975 (0.965 for the smaller
basis set) in the fingerprint region (1000–1900 cm–1), which experience suggests to be appropriate at these levels of
theory.[45] Computed spectra were convoluted
with a 20 cm–1 fwhm Gaussian line-shape function.The conformations to be considered were developed by trial computation
of structures known to be chemically reasonable. Not many conformations
are possible which bind four or more Lewis-basic chelation sites to
the metal ion for these highly deprotonated ligands, so manual searching
was feasible. Alternative low energy structures are shown in the Supporting
Information, Figures S1–S3.
Results
and Discussion
Constraints on Ligand Deprotonation and Chelation
Patterns
As the spectroscopic implications for the structures
of these complexes
are discussed below, it is important to have in mind the choices and
constraints imposed by the removal of three protons to form the monoanionic
complexes. The simplest case is GGG (or AAA) which has four potential
metal-chelation points (the COOH, amino-N and two amide linkages)
and three ionizable protons (COOH and two amide protons). Each amide
linkage gives one ionizable proton and also gives one chelation site
being either the amide carbonyl oxygen or the amide-nitrogen after
iminol rearrangement (and deprotonation). The N-terminal amino nitrogen
affords an additional binding site, but no ionizable proton. To form
a four-coordinate complex of net charge −1 with a + 2 charge
metal ion requires removing all three protons, and binding all four
chelation points. This leaves no degrees of freedom, and the binding
is an obligatory Im2 [NNON] pattern. As a useful reference point for
identifying the [NNON] spectroscopic features in looking below at
the spectra of the histidine tripeptides, we include in the figures
the assigned spectrum of the previously reported[12] anionic complex NiAAA. The geometry of this complex is
essentially the same as that for the solution-phase Cu(II) complex
of GGG, shown as structure 25 in ref (4), for example.An
additional (fifth) chelation point, along with an additional (fourth)
ionizable proton, results from extending the peptide chain to AAAA,
or as in the present case, from substituting a histidine residue into
AAA, providing an additional ionizable proton on the imidazole moiety.
Still within the requirements of removing three protons to give a
−1 complex with a +2 metal ion, several possibilities now appear
for three [H,A,A] isomers, since the remaining proton can potentially
occupy one of the chelation sites. Questions of structure regarding
these complexes thus revolve around the question whether the imidazole
side chain does in fact ionize its proton with accompanying side-chain
binding to the metal ion; if so, which of the other four chelation
sites bind the metal ion and where does the free proton go?
Overview
of the Spectra
The experimental spectra are
displayed in Figure , grouped both by ligand isomer and by metal ion. The features expected
for the tripeptides in general can be highlighted by comparison with
the NiAAA anion spectrum displayed at the bottom. Both displays suggest
that the spectra for the complexes with Cu and Ni are similar, and
these two metal ions will be analyzed together in much of the discussion. Figure B also suggests close
similarity of the spectra for a given ligand isomer. A key feature
that both spectra of the AAH complexes have in common is a small but
reproducible peak near 1750 cm–1, which is absent
for the HAA and AHA isomers (and also for the NiAAA reference spectrum).
Moreover, the AHA spectra appear similar to the corresponding HAA
spectra.
Figure 1
(A) Experimental spectra of the monoanionic complexes of Ni(II)
and Cu(II) with AAH, AHA, and HAA ligands. Spectra for copper complexes
are displayed in red, those for nickel complexes in black, and that
for NiAAA in green. (B) Same spectra as in part A, regrouped by metal
ion.
(A) Experimental spectra of the monoanionic complexes of Ni(II)
and Cu(II) with AAH, AHA, and HAA ligands. Spectra for copper complexes
are displayed in red, those for nickel complexes in black, and that
for NiAAA in green. (B) Same spectra as in part A, regrouped by metal
ion.
Structure Assignments from
the IR Spectra
More incisive
structural analysis is based on comparison with calculated spectra.
In Figure , the best-fitting
computationally predicted spectra are displayed in green, overlaid
on the experimental spectra. These best matches are selected from
an extensive set of computed spectra for possible conformations displayed
in Figures S4–S9 in the Supporting
Information. Note that for CuAAH, NiAAH, CuAHA and NiAHA the best-match
computed spectrum is a 50/50 average of two Im2 [NNON] isomers having
similar calculated energies, see Figures S1 and S2; these conformers correspond to the lowest energy structures
identified (see Table ). Moreover, for CuAAH and NiAAH, a contribution of 25% has been
added in for the higher-energy Im2 [NNNR] conformer shown in Figure S1. This fraction is solely based on a
very qualitative matching of spectral intensities and does not (necessarily)
correspond to actual fractional populations.
Figure 2
Comparison of calculated
spectra (green) with experimental spectra
(black) for the six complexes of Cu and Ni with each of the three
[A,A,H] isomeric ligands. The COOH feature near 1750 cm–1 in the AAH complexes is assigned to the minority Im2 [NNNR] fraction
of the ions, while the shoulder near 1660 cm–1 in
the COO region of these two spectra is assigned to the majority Im2
[NNON] fraction. Main vibrational mode characters are indicated in
the bottom spectrum (for AAA); for the His-containing ligands the
mode characters are largely analogous to those in AAA and only where
deviating mode characters are found the bands are labeled in the top
three spectra.
Comparison of calculated
spectra (green) with experimental spectra
(black) for the six complexes of Cu and Ni with each of the three
[A,A,H] isomeric ligands. The COOH feature near 1750 cm–1 in the AAH complexes is assigned to the minority Im2 [NNNR] fraction
of the ions, while the shoulder near 1660 cm–1 in
the COO region of these two spectra is assigned to the majority Im2
[NNON] fraction. Main vibrational mode characters are indicated in
the bottom spectrum (for AAA); for the His-containing ligands the
mode characters are largely analogous to those in AAA and only where
deviating mode characters are found the bands are labeled in the top
three spectra.The first conclusion
is that the lowest-energy complex for all
three ligand isomers does not have the imidazole moiety bound to the
metal ion. This conclusion is supported by both the calculated relative
energies and the spectroscopic data. Thus, the dominant structure
for all six complexes in Figure is the Im2 [NNON] structure, but we note that the
spectra of the Cu and Ni complexes with AAH also definitely show an
admixture of the Im2 [NNNR] structure having the imidazole ring bound
to the metal ion.For the HAA and AHA isomers, an Im2 [NNNR]
structure having a square-planar
4N cage and a reasonable relative energy and geometry is not possible.
Im2 [NNOR] structures with a metal coordinated imidazole are possible
for the HAA isomer, but are about 40 to 60 kJ/mol higher in energy
and their predicted spectra are poor matches to the observations (Figures S8 and S9).However, the situation
is different for AAH. Only for this isomer
there is a thermochemically reasonable possibility of forming the
ATCUN 4N-binding pattern (Im2 [NNNR] in our terminology or [NIm,2N–,NH2] in solution-phase
terminology[7]). For both Cu and Ni, this
is not the lowest-energy gas-phase structure (+13 and +26 kJ mol–1, respectively) and predicted spectra by themselves
do not match the experimental spectra (Figures S4 and S5). However, both of these IRMPD spectra show a feature
near 1750 cm–1, which we can attribute only to this
structure, because of the unbound carboxyl CO stretching vibration.
In contrast to the Im2 [NNON] conformers, the Im2 [NNNR] complexes
are deprotonated at the imidazole ring instead of at the C-terminal
COOH group. Observation of the 1750 cm–1 band is
therefore strong evidence for a fraction of the population having
these Im2 [NNNR] structures. A decrease in intensity in the 1200–1300
cm–1 range is also noted for AAH complexes with
respect to AHA and HAA complexes.The imidazole-coordinated
conformations for AAH complexes are not
expected to be thermally accessible (at least according to the B3LYP
energies) and are probably kinetically trapped. The best-match calculated
spectra shown in Figure for both complexes (green traces) include a contribution of 25%
from the Im2 [NNNR] 4N-structure, which gives a modest overall improvement
in the fit and, most importantly, accounts for the short-wavelength
feature. The distinctive 1750 cm–1 peak is not calculated
at exactly the correct wavelength in either case: we attribute this
to a previously noted deficiency of B3LYP vibrational calculations,
which appear to consistently give slightly deviating values for high-frequency
C=O stretching modes (>1700 cm–1) of unchelated
C=O’s in for instance peptides and acetophenone.[47]Previous work on complexes of the neutral
peptides coordinated
to the 2+ metal ion[13] suggests the possibility
of structures of the “charge-solvated” (CS) type having
one or more amide linkages in the amido form with the carbonyl oxygen
binding the metal. These previous results for the M(II)[H,A,A]2+ complexes indicated that CS binding of the metal ion was
frequently observable along with Im-type binding. For the anionic
complexes, CS2 configurations are not feasible, but Im1CS1 [NOOR]
structures are potentially possible, though with rather high relative
energies (Figures S1–S3). Neither
the IR spectra nor the calculations suggest a likelihood of any CS2
or Im1CS1 contributions to these ion populations. Hence, we conclude
that the extensive deprotonation of the present systems makes CS binding
of the metal ion very unfavorable.
Correlation with Solution
and Condensed Phases
Our
gas-phase experimental results in all six cases assign an Im2 [NNON]
square-planar binding pattern with the imidazole side chain remote
and hydrogen bonded, as the most energetically favored configuration.
Unique to the AAH complexes, a minority presence of complexes with
the Im2 [NNNR] binding motif has been established. How these results
relate to condensed phase observations depends strongly on which of
the three isomeric ligands is considered.[7,18] Current
condensed-phase understanding (see, for example, refs (6 and 7)) is exemplified in the recent report of Khoury et al.[48] on Cu(II) complexes with three [H,E,G] isomers,
with histidine occupying the three possible positions. For the purpose
of comparison with our results, we can ignore the presence of the
glutamic acid residue (E) in their study, since the Glu side chain
in all three cases plays a spectator role, never coordinating to the
metal ion. Their results can be considered a good representation of
recent understanding of the histidine tripeptide complexes and the
structure diagrams assigned in their study (reproduced here as Figure ) provide an excellent
framework for the present discussion.
Figure 3
Solution-phase structures assigned by
Khoury et al.[48] for three [H,E,G] isomers
coordinated to Cu(II).
Note that the Glu residue is not coordinated to the Cu ion in any
of the complexes and can be ignored in the present discussion. Reproduced
with permission from ref (48). Copyright 2014 American Chemical Society.
Solution-phase structures assigned by
Khoury et al.[48] for three [H,E,G] isomers
coordinated to Cu(II).
Note that the Glu residue is not coordinated to the Cu ion in any
of the complexes and can be ignored in the present discussion. Reproduced
with permission from ref (48). Copyright 2014 American Chemical Society.
1-His
In general the condensed-phase literature of
binding to single-histidine peptide sequences considers the imidazole
to be directly bound to the metal,[7,16] but this is
not necessarily the case for His positioned at an (unprotected) N-terminus
as in HAA or HEG. Khoury et al. (see Figure b) assign a structure for CuHEG essentially
similar to our Im2 [NNON] structure. Other examples of such observations
can be noted: for the complex of the 1-His tetrapeptide HVGD with
Cu(II), Myari et al.[49] also report a structure
analogous to our assigned Im2 [NNON] structure.No planar 4N
structure (Im2 [NNNR]) is feasible for 1-Histripeptides. With Ni2+ it is possible, but very unfavorable energetically (+114
kJ mol–1), to wrap the N-terminus around in a nonplanar
Im2 [NNONR] complex (high-spin triplet), see Figure S3. However, this structure has not been observed in the present
experiments nor has it been reported to our knowledge in the condensed-phase
literature.
2-His
For tripeptides with His in
the central position,
it is essentially impossible for a 4-coordinate planar structure to
have the imidazole and two deprotonated amidenitrogens bound simultaneously
to the metal ion. In general,[7,18,22,47] solution-phase structures retain
the imidazole-metal bond, adopting a 3-coordinate peptide-binding
pattern Im1 [NNR], involving only one deprotonated amidenitrogen
site; a fourth external donor then coordinates to the metal center,
see for example the structure proposed for GHE[48] in Figure a and for GHG in ref (50). Addition of a second ligand to form a CuL2 complex is
another possible route to finding sufficient ligation to satisfy the
tetradentate Cu(II) requirement.[18] In the
gas phase with no H2O present, as with HAA, the favored
structure takes a different course, giving up the imidazole coordination
in order to achieve tetracoordinate binding via the Im2 [NNON] motif.
3-His
Tripeptides with C-terminal histidine, and in
general peptides with histidine in the third position, chelating Cu(II)
or Ni(II) ions have the immensely favorable Im2 [NNNR] square-planar
4N coordination available. This ATCUN configuration is so stable and
dominant in condensed media that a surprise of the present study was
finding that this is not the most stable, nor the most abundant, conformation
for the gas-phase anionic complexes with AAH. Instead, this Im2 [NNNR]
conformer is present in our ion population as a minority constituent,
giving the small but reproducible vibrational band near 1750 cm–1.Common to all the reported condensed-phase
binding patterns in 3-His peptides is the direct binding of the imidazole
ring to the metal. This highlights the interest of the present experimental
and computational result that these three gas-phase tripeptides favor
an [NNON] binding pattern having the imidazole ring remote from the
metal ion. Hydrogen bonding between the imidazole ring and a carbonyl
or carboxylateoxygen stabilizes this structure in the absence of
water. However, the minority Im2 [NNNR] population is analogous to
the common condensed-phase ATCUN configuration, as for instance the
[NNNR] configuration for the CuGGH complex[22,23] and the Cu2+DAHK complex[15] (except that the loosely bound apical water in the X-ray structure
as shown in Figure of that paper is not present in the gas phase).
Conclusions
Compared with condensed-phase observations of deprotonated histidine-containing
tripeptide systems, the gas phase reveals both parallels and contrasts.
While the imidazole side chain is generally considered to enhance
metal-ion binding, it is not true that a histidine residue inevitably
coordinates to the metal ion, not even in solution. The present results
show that the favored gas-phase structures avoid metal-imidazole binding
for any of the three peptide isomers.The chelation of both
Cu and Ni ions in the −1 net-charge
complexes follows the square-planar, four-coordinate low-spin pattern.
In all cases, the dominant gas-phase structure is the Im2 [NNON] pattern,
in which the metal ion is chelated by two deprotonated amidenitrogens,
a carboxylateoxygen and the N-terminal nitrogen. The imidazole ring
is remote from the metal ion, which deviates from the usual structures
of histidinemetal-complexing systems in condensed phase. For peptide
ligands with His as the third residue (3-His), the 4N ATCUN chelation
pattern Im2 [NNNR] with direct imidazole binding is highly favorable
and is widely observed in condensed-phase systems. In our gas-phase
results, however, this pattern is less stable than the alternative
Im2 [NNON] and is observed as a minority constituent in the ion populations
of the AAH complexes with Cu and Ni.The present gas-phase triply
deprotonated monoanionic complexes
are shown to be model systems paralleling to some extent the solution-phase
behavior in appropriate pH ranges. The contrast of the present systems,
showing exclusive Cu and Ni binding in square planar Im binding patterns,
with the corresponding dicationic complexes, which display competition
between Im and CS binding modes,[13] suggests
the possibility of using explicit deprotonation in the gas phase to
model pH variations in solution. Other charge states can model different
degrees of deprotonation and this approach is being pursued in future
studies. Finally, microhydration by water to fill vacant metal sites
(as was investigated for NiGGG·H2O[51]) can be explored in gas-phase complexes like 2-His peptides,
where peptide chelation alone does not saturate the square-planar
sites in solution.
Authors: Noémi I Jakab; Béla Gyurcsik; Tamás Körtvélyesi; Ilze Vosekalna; Jan Jensen; Erik Larsen Journal: J Inorg Biochem Date: 2007-06-02 Impact factor: 4.155