Literature DB >> 2981636

A fraction of the mouse genome that is derived from islands of nonmethylated, CpG-rich DNA.

A Bird, M Taggart, M Frommer, O J Miller, D Macleod.   

Abstract

About 1% of the mouse genome is cleaved by Hpa II to give a discrete fraction on gels. The nonmethylated fraction is present in all tested tissues, including sperm, and contains Hpa II sites at about 15 times their frequency in bulk DNA. About 80% of the fraction is composed of sequences that occur once or a few times per genome; the remainder is largely rDNA. Unlike bulk DNA, the fraction is not deficient in CpG, and this may be directly due to the lack of methylation. Genomic mapping of three nonribosomal fragments showed that they are part of islands of DNA within which nonmethylated Hpa II and Hha I sites are highly concentrated. We estimate about 30,000 islands per haploid genome and discuss evidence that many may be associated with genes.

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Year:  1985        PMID: 2981636     DOI: 10.1016/0092-8674(85)90312-5

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  242 in total

1.  Sp1 mediates cell proliferation-dependent regulation of rat DNA topoisomerase IIalpha gene promoter.

Authors:  J H Yoon; J K Kim; G B Rha; M Oh; S H Park; R H Seong; S H Hong; S D Park
Journal:  Biochem J       Date:  1999-12-01       Impact factor: 3.857

Review 2.  Above and within the genome: epigenetics past and present.

Authors:  F D Urnov; A P Wolffe
Journal:  J Mammary Gland Biol Neoplasia       Date:  2001-04       Impact factor: 2.673

Review 3.  Rett syndrome and MeCP2: linking epigenetics and neuronal function.

Authors:  Mona D Shahbazian; Huda Y Zoghbi
Journal:  Am J Hum Genet       Date:  2002-11-19       Impact factor: 11.025

4.  Global changes in genomic methylation levels during early development of the zebrafish embryo.

Authors:  A A Mhanni; R A McGowan
Journal:  Dev Genes Evol       Date:  2004-07-29       Impact factor: 0.900

5.  CpG island chromatin: a platform for gene regulation.

Authors:  Neil P Blackledge; Robert Klose
Journal:  Epigenetics       Date:  2011-02-01       Impact factor: 4.528

Review 6.  Epigenetics and the developmental origins of lung disease.

Authors:  Lisa A Joss-Moore; Kurt H Albertine; Robert H Lane
Journal:  Mol Genet Metab       Date:  2011-07-23       Impact factor: 4.797

7.  The Huntington disease locus is most likely within 325 kilobases of the chromosome 4p telomere.

Authors:  N A Doggett; J F Cheng; C L Smith; C R Cantor
Journal:  Proc Natl Acad Sci U S A       Date:  1989-12       Impact factor: 11.205

8.  cis regulation of the keratin 18 gene in transgenic mice.

Authors:  N S Neznanov; R G Oshima
Journal:  Mol Cell Biol       Date:  1993-03       Impact factor: 4.272

9.  miR-29b induces SOCS-1 expression by promoter demethylation and negatively regulates migration of multiple myeloma and endothelial cells.

Authors:  Nicola Amodio; Dina Bellizzi; Marzia Leotta; Lavinia Raimondi; Lavinia Biamonte; Patrizia D'Aquila; Maria Teresa Di Martino; Teresa Calimeri; Marco Rossi; Marta Lionetti; Emanuela Leone; Giuseppe Passarino; Antonino Neri; Antonio Giordano; Pierosandro Tagliaferri; Pierfrancesco Tassone
Journal:  Cell Cycle       Date:  2013-09-25       Impact factor: 4.534

10.  Long range genome structure around the human alpha-globin complex analysed by PFGE.

Authors:  N Fischel-Ghodsian; R D Nicholls; D R Higgs
Journal:  Nucleic Acids Res       Date:  1987-08-11       Impact factor: 16.971

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