Literature DB >> 29787888

Understanding the microbiome of diabetic foot osteomyelitis: insights from molecular and microscopic approaches.

K Johani1, B G Fritz2, T Bjarnsholt3, B A Lipsky4, S O Jensen5, M Yang6, A Dean6, H Hu1, K Vickery1, M Malone7.   

Abstract

OBJECTIVES: Rigorous visual evidence on whether or not biofilms are involved in diabetic foot osteomyelitis (DFO) is lacking. We employed a suite of molecular and microscopic approaches to investigate the microbiome, and phenotypic state of microorganisms involved in DFO.
METHODS: In 20 consecutive subjects with suspected DFO, we collected intraoperative bone specimens. To explore the microbial diversity present in infected bone we performed next generation DNA sequencing. We used scanning electron microscopy (SEM) and peptide nucleic acid fluorescent in situ hybridization (PNA-FISH) with confocal microscopy to visualize and confirm the presence of biofilms.
RESULTS: In 19 of 20 (95%) studied patients presenting with DFO, it was associated with an infected diabetic foot ulcer. By DNA sequencing of infected bone, Corynebacterium sp. was the most commonly identified microorganism, followed by Finegoldia sp., Staphylococcus sp., Streptococcus sp., Porphyromonas sp., and Anaerococcus sp. Six of 20 bone samples (30%) contained only one or two pathogens, while the remaining 14 (70%) had polymicrobial communities. Using a combination of SEM and PNA-FISH, we identified microbial aggregates in biofilms in 16 (80%) bone specimens and found that they were typically coccoid or rod-shaped aggregates.
CONCLUSIONS: The presence of biofilms in DFO may explain why non-surgical treatment of DFO, relying on systemic antibiotic therapy, may not resolve some chronic infections caused by biofilm-producing strains.
Copyright © 2018 European Society of Clinical Microbiology and Infectious Diseases. Published by Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Biofilm; Diabetic foot osteomyelitis; Fluorescent in situ hybridization; Next generation DNA sequencing; Scanning electron microscopy

Mesh:

Substances:

Year:  2018        PMID: 29787888     DOI: 10.1016/j.cmi.2018.04.036

Source DB:  PubMed          Journal:  Clin Microbiol Infect        ISSN: 1198-743X            Impact factor:   8.067


  10 in total

Review 1.  Biofilm Survival Strategies in Chronic Wounds.

Authors:  Ida Clement Thaarup; Anne Kristine Servais Iversen; Mads Lichtenberg; Thomas Bjarnsholt; Tim Holm Jakobsen
Journal:  Microorganisms       Date:  2022-04-05

Review 2.  Metagenomics to Identify Pathogens in Diabetic Foot Ulcers and the Potential Impact for Clinical Care.

Authors:  Brian M Schmidt; John Erb-Downward; Piyush Ranjan; Robert Dickson
Journal:  Curr Diab Rep       Date:  2021-06-21       Impact factor: 4.810

3.  Comparative study of culture, next-generation sequencing, and immunoassay for identification of pathogen in diabetic foot ulcer.

Authors:  Jason Scott Lipof; Courtney Marie Cora Jones; John Daiss; Irvin Oh
Journal:  J Orthop Res       Date:  2021-02-15       Impact factor: 3.494

4.  Diabetic foot infection and osteomyelitis. Are deep-tissue cultures necessary?

Authors:  Angeliki M Andrianaki; Christos Koutserimpas; Alexandros Kafetzakis; Emmanouil Tavlas; Sofia Maraki; John A Papadakis; Petros Ioannou; George Samonis; Diamantis P Kofteridis
Journal:  Germs       Date:  2020-12-28

5.  Emerging Diabetic Foot Ulcer Microbiome Analysis Using Cutting Edge Technologies.

Authors:  Brian M Schmidt
Journal:  J Diabetes Sci Technol       Date:  2021-02-12

6.  Efficacy of a topical concentrated surfactant gel on microbial communities in non-healing diabetic foot ulcers with chronic biofilm infections: A proof-of-concept study.

Authors:  Matthew Malone; Michael Radzieta; Saskia Schwarzer; Slade O Jensen; Lawrence A Lavery
Journal:  Int Wound J       Date:  2021-01-21       Impact factor: 3.315

7.  Next-Generation Sequencing for Pathogen Identification in Infected Foot Ulcers.

Authors:  Yoonjung Choi; Eimi Oda; Olivia Waldman; Thomas Sajda; Christopher Beck; Irvin Oh
Journal:  Foot Ankle Orthop       Date:  2021-07-12

8.  Metatranscriptome sequencing identifies Escherichia are major contributors to pathogenic functions and biofilm formation in diabetes related foot osteomyelitis.

Authors:  Michael Radzieta; Matthew Malone; Mehtab Ahmad; Hugh G Dickson; Saskia Schwarzer; Slade O Jensen; Lawrence A Lavery
Journal:  Front Microbiol       Date:  2022-08-01       Impact factor: 6.064

Review 9.  Surgical techniques for Bone Biopsy in Diabetic Foot Infection, and association between results and treatment duration.

Authors:  Eric Senneville; Donatienne Joulie; Nicolas Blondiaux; Olivier Robineau
Journal:  J Bone Jt Infect       Date:  2020-06-23

Review 10.  Do Mixed-Species Biofilms Dominate in Chronic Infections?-Need for in situ Visualization of Bacterial Organization.

Authors:  Lasse Kvich; Mette Burmølle; Thomas Bjarnsholt; Mads Lichtenberg
Journal:  Front Cell Infect Microbiol       Date:  2020-08-05       Impact factor: 5.293

  10 in total

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