Literature DB >> 29784370

The classification of lung cancers and their degree of malignancy by FTIR, PCA-LDA analysis, and a physics-based computational model.

E Kaznowska1, J Depciuch2, K Łach3, M Kołodziej4, A Koziorowska5, J Vongsvivut6, I Zawlik7, M Cholewa8, J Cebulski8.   

Abstract

Lung cancer has the highest mortality rate of all malignant tumours. The current effects of cancer treatment, as well as its diagnostics, are unsatisfactory. Therefore it is very important to introduce modern diagnostic tools, which will allow for rapid classification of lung cancers and their degree of malignancy. For this purpose, the authors propose the use of Fourier Transform InfraRed (FTIR) spectroscopy combined with Principal Component Analysis-Linear Discriminant Analysis (PCA-LDA) and a physics-based computational model. The results obtained for lung cancer tissues, adenocarcinoma and squamous cell carcinoma FTIR spectra, show a shift in wavenumbers compared to control tissue FTIR spectra. Furthermore, in the FTIR spectra of adenocarcinoma there are no peaks corresponding to glutamate or phospholipid functional groups. Moreover, in the case of G2 and G3 malignancy of adenocarcinoma lung cancer, the absence of an OH groups peak was noticed. Thus, it seems that FTIR spectroscopy is a valuable tool to classify lung cancer and to determine the degree of its malignancy.
Copyright © 2018 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Adenocarcinoma; FTIR; Lung cancer classification; PCA-LDA; Physics model; Squamous cell carcinoma

Mesh:

Year:  2018        PMID: 29784370     DOI: 10.1016/j.talanta.2018.04.083

Source DB:  PubMed          Journal:  Talanta        ISSN: 0039-9140            Impact factor:   6.057


  9 in total

1.  A comparison of mid-infrared spectral regions on accuracy of tissue classification.

Authors:  Shachi Mittal; Rohit Bhargava
Journal:  Analyst       Date:  2019-04-08       Impact factor: 4.616

2.  Tracking Extracellular Matrix Remodeling in Lungs Induced by Breast Cancer Metastasis. Fourier Transform Infrared Spectroscopic Studies.

Authors:  Karolina Chrabaszcz; Katarzyna Kaminska; Karolina Augustyniak; Monika Kujdowicz; Marta Smeda; Agnieszka Jasztal; Marta Stojak; Katarzyna M Marzec; Kamilla Malek
Journal:  Molecules       Date:  2020-01-06       Impact factor: 4.411

3.  Characterisation of breast cancer molecular signature and treatment assessment with vibrational spectroscopy and chemometric approach.

Authors:  Magdalena Kołodziej; Ewa Kaznowska; Sylwia Paszek; Józef Cebulski; Edyta Barnaś; Marian Cholewa; Jitraporn Vongsvivut; Izabela Zawlik
Journal:  PLoS One       Date:  2022-03-09       Impact factor: 3.240

4.  Artificial neural network in the discrimination of lung cancer based on infrared spectroscopy.

Authors:  Eiron John Lugtu; Denise Bernadette Ramos; Alliah Jen Agpalza; Erika Antoinette Cabral; Rian Paolo Carandang; Jennica Elia Dee; Angelica Martinez; Julius Eleazar Jose; Abegail Santillan; Ruth Bangaoil; Pia Marie Albano; Rock Christian Tomas
Journal:  PLoS One       Date:  2022-05-12       Impact factor: 3.752

5.  Distinguishing Ewing sarcoma and osteomyelitis using FTIR spectroscopy.

Authors:  Radosław Chaber; Christopher J Arthur; Joanna Depciuch; Kornelia Łach; Anna Raciborska; Elżbieta Michalak; Józef Cebulski
Journal:  Sci Rep       Date:  2018-10-10       Impact factor: 4.379

6.  New insights into spectral histopathology: infrared-based scoring of tumour aggressiveness of squamous cell lung carcinomas.

Authors:  Vincent Gaydou; Myriam Polette; Cyril Gobinet; Claire Kileztky; Jean-François Angiboust; Philippe Birembaut; Vincent Vuiblet; Olivier Piot
Journal:  Chem Sci       Date:  2019-03-05       Impact factor: 9.825

Review 7.  Fourier Transform Infrared Spectroscopy as a Cancer Screening and Diagnostic Tool: A Review and Prospects.

Authors:  Kar-Yan Su; Wai-Leng Lee
Journal:  Cancers (Basel)       Date:  2020-01-01       Impact factor: 6.639

8.  Geographic Authentication of Eucommia ulmoides Leaves Using Multivariate Analysis and Preliminary Study on the Compositional Response to Environment.

Authors:  Chao-Yong Wang; Li Tang; Li Li; Qiang Zhou; You-Ji Li; Jing Li; Yuan-Zhong Wang
Journal:  Front Plant Sci       Date:  2020-02-19       Impact factor: 5.753

Review 9.  Metabolic Profile Characterization of Different Thyroid Nodules Using FTIR Spectroscopy: A Review.

Authors:  Vanessa Neto; Sara Esteves-Ferreira; Isabel Inácio; Márcia Alves; Rosa Dantas; Idália Almeida; Joana Guimarães; Teresa Azevedo; Alexandra Nunes
Journal:  Metabolites       Date:  2022-01-08
  9 in total

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