Literature DB >> 29779095

CRISPR/Cas13a targeting of RNA virus in plants.

Kul Bhushan1.   

Abstract

KEY MESSAGE: This approach is quite promising to control plant viral diseases and create synthetic networks to better understand the structure/function relationship in RNA and proteins. Plant viruses are obligate intracellular parasites which causes enormous losses in crop yield worldwide. These viruses replicate into infected cells by highjacking host cellular machinery. Over the last two decades, diverse approaches such as conventional breeding, transgenic approach and gene silencing strategies have been used to control RNA viruses, but escaped due to high rate of mutation. Recently, a novel CRISPR enzyme, called Cas13a, has been used engineered to confer RNA viruses resistance in plants. Here, we summarize the recent breakthrough of CRISPR/Cas13a and its applications in RNA biology.

Entities:  

Keywords:  CRISPR/Cas13a; Genome editing; Potyvirus; RNA; Translation regulation

Mesh:

Substances:

Year:  2018        PMID: 29779095     DOI: 10.1007/s00299-018-2297-2

Source DB:  PubMed          Journal:  Plant Cell Rep        ISSN: 0721-7714            Impact factor:   4.570


  46 in total

Review 1.  Plasmodesmata: gateways to local and systemic virus infection.

Authors:  Yoselin Benitez-Alfonso; Christine Faulkner; Christophe Ritzenthaler; Andrew J Maule
Journal:  Mol Plant Microbe Interact       Date:  2010-11       Impact factor: 4.171

Review 2.  Potyviruses and the digital revolution.

Authors:  Adrian Gibbs; Kazusato Ohshima
Journal:  Annu Rev Phytopathol       Date:  2010       Impact factor: 13.078

Review 3.  Plant immune responses against viruses: how does a virus cause disease?

Authors:  Kranthi K Mandadi; Karen-Beth G Scholthof
Journal:  Plant Cell       Date:  2013-05-24       Impact factor: 11.277

4.  Use of aphid stylectomy and RT-PCR for the detection of transporter mRNAs in sieve elements.

Authors:  Christian Doering-Saad; H John Newbury; Jeff S Bale; Jeremy Pritchard
Journal:  J Exp Bot       Date:  2002-04       Impact factor: 6.992

5.  Diversity and evolution of class 2 CRISPR-Cas systems.

Authors:  Sergey Shmakov; Aaron Smargon; David Scott; David Cox; Neena Pyzocha; Winston Yan; Omar O Abudayyeh; Jonathan S Gootenberg; Kira S Makarova; Yuri I Wolf; Konstantin Severinov; Feng Zhang; Eugene V Koonin
Journal:  Nat Rev Microbiol       Date:  2017-01-23       Impact factor: 60.633

6.  Two distinct RNase activities of CRISPR-C2c2 enable guide-RNA processing and RNA detection.

Authors:  Alexandra East-Seletsky; Mitchell R O'Connell; Spencer C Knight; David Burstein; Jamie H D Cate; Robert Tjian; Jennifer A Doudna
Journal:  Nature       Date:  2016-09-26       Impact factor: 49.962

7.  Programmable RNA Tracking in Live Cells with CRISPR/Cas9.

Authors:  David A Nelles; Mark Y Fang; Mitchell R O'Connell; Jia L Xu; Sebastian J Markmiller; Jennifer A Doudna; Gene W Yeo
Journal:  Cell       Date:  2016-03-17       Impact factor: 41.582

8.  RNA virus interference via CRISPR/Cas13a system in plants.

Authors:  Rashid Aman; Zahir Ali; Haroon Butt; Ahmed Mahas; Fatimah Aljedaani; Muhammad Zuhaib Khan; Shouwei Ding; Magdy Mahfouz
Journal:  Genome Biol       Date:  2018-01-04       Impact factor: 13.583

9.  Live-cell imaging of viral RNA genomes using a Pumilio-based reporter.

Authors:  Jens Tilsner; Olga Linnik; Nynne M Christensen; Karen Bell; Ian M Roberts; Christophe Lacomme; Karl J Oparka
Journal:  Plant J       Date:  2008-11-17       Impact factor: 6.417

10.  Comprehensive analysis of the HEPN superfamily: identification of novel roles in intra-genomic conflicts, defense, pathogenesis and RNA processing.

Authors:  Vivek Anantharaman; Kira S Makarova; A Maxwell Burroughs; Eugene V Koonin; L Aravind
Journal:  Biol Direct       Date:  2013-06-15       Impact factor: 4.540

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  3 in total

1.  Generation of virus-resistant potato plants by RNA genome targeting.

Authors:  Xiaohui Zhan; Fengjuan Zhang; Ziyang Zhong; Ruhao Chen; Yong Wang; Ling Chang; Ralph Bock; Bihua Nie; Jiang Zhang
Journal:  Plant Biotechnol J       Date:  2019-03-08       Impact factor: 9.803

2.  Multi-targeting of viral RNAs with synthetic trans-acting small interfering RNAs enhances plant antiviral resistance.

Authors:  Alberto Carbonell; Purificación Lisón; José-Antonio Daròs
Journal:  Plant J       Date:  2019-09-16       Impact factor: 6.417

Review 3.  Next-Generation Sequencing and the CRISPR-Cas Nexus: A Molecular Plant Virology Perspective.

Authors:  Muhammad Shafiq Shahid; Muhammad Naeem Sattar; Zafar Iqbal; Amir Raza; Abdullah M Al-Sadi
Journal:  Front Microbiol       Date:  2021-01-12       Impact factor: 5.640

  3 in total

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