Literature DB >> 29771660

Machine learning for biomarker identification in cancer research - developments toward its clinical application.

Zeenia Jagga1, Dinesh Gupta1.   

Abstract

The patterns identified from the systematically collected molecular profiles of patient tumor samples, along with clinical metadata, can assist personalized treatments for effective management of cancer patients with similar molecular subtypes. There is an unmet need to develop computational algorithms for cancer diagnosis, prognosis and therapeutics that can identify complex patterns and help in classifications based on plethora of emerging cancer research outcomes in public domain. Machine learning, a branch of artificial intelligence, holds a great potential for pattern recognition in cryptic cancer datasets, as evident from recent literature survey. In this review, we focus on the current status of machine learning applications in cancer research, highlighting trends and analyzing major achievements, roadblocks and challenges toward its implementation in clinics.

Entities:  

Keywords:  cancer biomarkers; genomics; machine learning; personalized medicine; predictive classification models; sequencing

Year:  2015        PMID: 29771660     DOI: 10.2217/pme.15.5

Source DB:  PubMed          Journal:  Per Med        ISSN: 1741-0541            Impact factor:   2.512


  8 in total

1.  Biomarkers for the Prediction and Diagnosis of Fibrostenosing Crohn's Disease: A Systematic Review.

Authors:  Calen A Steiner; Jeffrey A Berinstein; Jeremy Louissaint; Peter D R Higgins; Jason R Spence; Carol Shannon; Cathy Lu; Ryan W Stidham; Joel G Fletcher; David H Bruining; Brian G Feagan; Vipul Jairath; Mark E Baker; Dominik Bettenworth; Florian Rieder
Journal:  Clin Gastroenterol Hepatol       Date:  2021-06-02       Impact factor: 11.382

2.  Ensemble machine learning model identifies patients with HFpEF from matrix-related plasma biomarkers.

Authors:  Michael Ward; Amirreza Yeganegi; Catalin F Baicu; Amy D Bradshaw; Francis G Spinale; Michael R Zile; William J Richardson
Journal:  Am J Physiol Heart Circ Physiol       Date:  2022-03-11       Impact factor: 4.733

Review 3.  Molecular Diagnostics in Clinical Oncology.

Authors:  Anna P Sokolenko; Evgeny N Imyanitov
Journal:  Front Mol Biosci       Date:  2018-08-27

4.  Models and Machines: How Deep Learning Will Take Clinical Pharmacology to the Next Level.

Authors:  Lucy Hutchinson; Bernhard Steiert; Antoine Soubret; Jonathan Wagg; Alex Phipps; Richard Peck; Jean-Eric Charoin; Benjamin Ribba
Journal:  CPT Pharmacometrics Syst Pharmacol       Date:  2019-02-03

5.  Uncertainty reduction in biochemical kinetic models: Enforcing desired model properties.

Authors:  Ljubisa Miskovic; Jonas Béal; Michael Moret; Vassily Hatzimanikatis
Journal:  PLoS Comput Biol       Date:  2019-08-20       Impact factor: 4.475

Review 6.  Towards Multiplexed and Multimodal Biosensor Platforms in Real-Time Monitoring of Metabolic Disorders.

Authors:  Sung Sik Chu; Hung Anh Nguyen; Jimmy Zhang; Shawana Tabassum; Hung Cao
Journal:  Sensors (Basel)       Date:  2022-07-12       Impact factor: 3.847

7.  Biomarkers from circulating neutrophil transcriptomes have potential to detect unruptured intracranial aneurysms.

Authors:  Vincent M Tutino; Kerry E Poppenberg; Lu Li; Hussain Shallwani; Kaiyu Jiang; James N Jarvis; Yijun Sun; Kenneth V Snyder; Elad I Levy; Adnan H Siddiqui; John Kolega; Hui Meng
Journal:  J Transl Med       Date:  2018-12-28       Impact factor: 5.531

Review 8.  Development of artificial intelligence technology in diagnosis, treatment, and prognosis of colorectal cancer.

Authors:  Feng Liang; Shu Wang; Kai Zhang; Tong-Jun Liu; Jian-Nan Li
Journal:  World J Gastrointest Oncol       Date:  2022-01-15
  8 in total

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