| Literature DB >> 29769839 |
Vladimira Durmanova1, Zuzana Parnicka1, Juraj Javor1, Gabriel Minarik2, Lubomir Vrazda3, Barbora Vaseckova4, Karin Gmitterova5, Maria Kralova6, Jan Pecenak6, Peter Filipcik7, Ivana Shawkatova1.
Abstract
Alzheimer's disease (AD) is the most prevalent cause of dementia in elderly people worldwide. Many studies support the hypothesis that the inflammation of the CNS contributes to the neurodegeneration and disease progression. The integrin molecule α4β1, also known as very late antigen 4 (VLA-4), belongs to adhesion molecules that activate the inflammatory process through the migration of immune cells into the CNS. Therefore, the objective of our study was to analyze the association between two polymorphisms located in the ITGA4 gene encoding the α4 subunit of VLA-4 and the risk of AD. 104 late-onset AD patients and 206 control subjects from Slovakia were genotyped for ITGA4 gene SNP polymorphism rs113276800 (-269C/A) and rs1143676 (+3061A/G). The same study cohorts were also genotyped for the APOE-ε4, which is a known genetic factor associated with increased risk of AD developing. ITGA4 polymorphism analysis revealed significantly higher frequency of the +3061AG carriers in AD group compared to the controls (P ≤ 0.05). Following the APOE-ε4 stratification of study groups, the association remained significant only in APOE-ε4 noncarriers. Our study suggests a novel association of ITGA4 +3061A/G polymorphism with AD and its possible contribution to the disease pathology.Entities:
Mesh:
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Year: 2018 PMID: 29769839 PMCID: PMC5892238 DOI: 10.1155/2018/7623823
Source DB: PubMed Journal: Mediators Inflamm ISSN: 0962-9351 Impact factor: 4.711
Characteristics of the studied groups.
| Parameter | AD subjects ( | Controls ( |
|
|---|---|---|---|
| Gender ratio: male/female | 31/73 | 78/128 | 0.16 |
| Mean age ± SD (years) | 79.46 ± 6.16 | 76.22 ± 6.85 | <0.0001 |
| Mean onset age ± SD (years) | 77.4 ± 6.47 | — | — |
| MoCA score | 13.62 ± 5.72 | 28.52 ± 1.36 | <0.0001 |
| ApoE- | 39/65 | 41/165 | 0.0008 |
SD: standard deviation; MoCA: Montreal Cognitive Assessment; P ≤ 0.05 is considered as significant.
Allele and genotypes frequencies of the ITGA4 −269A/C and +3061A/G polymorphism in AD patients and controls.
| SNP/model | Allele/genotype | AD subjects ( | Controls ( | Univariate analysis | Multivariate analysis | ||
|---|---|---|---|---|---|---|---|
|
| OR (95% CI) |
| OR (95% CI) | ||||
| −269 C/A | C | 170 (81.73%) | 339 (82.28%) | — | — | — | — |
| A | 38 (18.27%) | 73 (17.72%) | 0.87 | 1.04 (0.67–1.60) | — | — | |
|
| |||||||
| Codominant | CC | 66 (63.46%) | 133 (64.56%) | 1.00 | 1.00 | ||
| CA | 38 (36.54%) | 73 (35.44%) | 0.85 | 1.05 (0.64–1.71) | 1.00 | 1.00 (0.60–1.68) | |
| AA | 0 (00.00%) | 0 (00.00%) | — | — | — | — | |
|
| |||||||
| Dominant | CC | 66 (63.46%) | 133 (64.56%) | 1.00 | 1.00 | ||
| CA + AA | 38 (36.54%) | 73 (35.44%) | 0.85 | 1.05 (0.64–1.71) | 1.00 | 1.00 (0.60–1.68) | |
|
| |||||||
| Recessive | CC + CA | 104 (100.00%) | 206 (100.00%) | — | — | — | — |
| AA | 0 (00.00%) | 0 (00.00%) | — | — | — | — | |
|
| |||||||
| +3061 A/G | A | 135 (64.90%) | 294 (71.36%) | — | — | — | — |
| G | 73 (35.10%) | 118 (28.64%) | 0.10 | 1.35 (0.94–1.92) | — | — | |
|
| |||||||
| Codominant | AA | 39 (37.50%) | 106 (51.46%) | 1.00 | 1.00 | ||
| AG | 57 (54.81%) | 82 (39.80%) |
| 1.89 (1.15–3.11) | 0.11 | 1.76 (1.04–2.97) | |
| GG | 8 (7.70%) | 18 (8.74%) | — | 1.21 (0.49–3.00) | — | 1.35 (0.52–3.51) | |
|
| |||||||
| Dominant | AA | 39 (37.50%) | 106 (51.46%) | 1.00 | 1.00 | ||
| AG + GG | 65 (62.50%) | 100 (48.54%) |
| 1.77 (1.09–2.86) |
| 1.69 (1.02–2.81) | |
|
| |||||||
| Recessive | AA + AG | 96 (92.31%) | 188 (91.26%) | 1.00 | 1.00 | ||
| GG | 8 (7.69%) | 18 (8.74%) | 0.75 | 0.87 (0.37–2.07) | 0.99 | 1.01 (0.40–2.52) | |
|
| |||||||
| Overdominant | AA + GG | 47 (45.19% | 124 (60.20%) | 1.00 | 1.00 | ||
| AG | 57 (54.81%) | 82 (39.80%) |
| 1.83 (1.14–2.95) |
| 1.68 (1.02–2.77) | |
|
| |||||||
| Haplotypes | CA | 58.21% | 63.70% | 1.00 | 1.00 | ||
| CG | 23.52% | 18.58% | 0.16 | 1.41 (0.88–2.25) | 0.2 | 1.39 (0.84–2.29) | |
| AG | 11.57% | 10.06% | 0.44 | 1.29 (0.68–2.44) | 0.46 | 1.29 (0.66–2.53) | |
| AA | 6.70% | 7.66% | 0.95 | 0.97 (0.41–2.31) | 0.76 | 0.87 (0.35–2.18) | |
Allele and genotype frequencies are presented as absolute numbers with percentages in parentheses. OR: odds ratio; CI: confidence interval. Univariate analysis is based on χ2 test. Multivariate analysis is adjusted by gender, age, and APOE-ε4 positivity. ∗P ≤ 0.05 is considered as significant.
Allele and genotypes frequencies of the ITGA4 −269A/C and +3061A/G polymorphism in APOE-ε4-positive AD patients and controls.
| SNP/model | Allele/genotype | AD subjects ( | Controls ( | Univariate analysis | Multivariate analysis | ||
|---|---|---|---|---|---|---|---|
|
| OR (95% CI) |
| OR (95% CI) | ||||
| −269 C/A | C | 64 (82.05%) | 68 (82.93%) | — | — | — | — |
| A | 14 (17.95%) | 14 (17.07%) | 0.88 | 1.06 (0.47–2.40) | — | — | |
|
| |||||||
| Codominant | CC | 25 (64.10%) | 27 (65.85%) | 1.00 | 1.00 | ||
| CA | 14 (35.90%) | 14 (34.15%) | 0.87 | 1.08 (0.43–2.71) | 0.95 | 0.97 (0.36–2.61) | |
| AA | 0 (00.00%) | 0 (00.00%) | — | — | — | — | |
|
| |||||||
| Dominant | CC | 25 (64.10%) | 27 (65.85%) | 1.00 | 1.00 | ||
| CA + AA | 14 (35.90%) | 14 (34.15%) | 0.87 | 1.08 (0.43–2.71) | 0.95 | 0.97 (0.36–2.61) | |
|
| |||||||
| Recessive | CC + CA | 39 (100.00%) | 41 (100.00%) | — | — | — | — |
| AA | 0 (00.00%) | 0 (00.00%) | — | — | — | — | |
|
| |||||||
| +3061 A/G | A | 53 (67.95%) | 57 (69.51%) | — | — | — | — |
| G | 25 (32.05%) | 25 (30.49%) | 0.83 | 1.08 (0.55–2.10) | — | — | |
|
| |||||||
| Codominant | AA | 17 (43.59%) | 18 (43.90%) | 1.00 | 1.00 | ||
| AG | 19 (48.72%) | 21 (51.22%) | 0.87 | 0.96 (0.39–2.38) | 0.87 | 0.93 (0.35–2.47) | |
| GG | 3 (7.69%) | 2 (4.88%) | — | 1.59 (0.24–10.70) | — | 1.58 (0.22–11.39) | |
|
| |||||||
| Dominant | AA | 17 (43.59%) | 18 (43.90%) | 1.00 | 1.00 | ||
| AG + GG | 22 (56.41%) | 23 (56.10%) | 0.98 | 1.01 (0.42–2.45) | 0.99 | 0.99 (0.39–2.56) | |
|
| |||||||
| Recessive | AA + AG | 36 (92.31%) | 39 (95.12%) | 1.00 | 1.00 | ||
| GG | 3 (7.69%) | 2 (4.88%) | 0.6 | 1.62 (0.26–10.29) | 0.61 | 1.64 (0.24–11.11) | |
|
| |||||||
| Overdominant | AA + GG | 20 (51.28%) | 20 (48.78%) | 1.00 | 1.00 | ||
| AG | 19 (48.72%) | 21 (51.22%) | 0.82 | 0.90 (0.38–2.17) | 0.79 | 0.88 (0.34–2.26) | |
|
| |||||||
| Haplotypes | CA | 60.48% | 62.69% | 1.00 | 1.00 | ||
| CG | 21.57% | 20.23% | 0.81 | 1.11 (0.46–2.68) | 0.78 | 1.15 (0.45–2.93) | |
| AG | 10.48% | 10.26% | 0.88 | 1.10 (0.32–3.77) | 0.96 | 0.97 (0.25–3.70) | |
| AA | 7.47% | 6.82% | 0.86 | 1.15 (0.24–5.50) | 0.93 | 1.09 (0.19–6.11) | |
Allele and genotype frequencies are presented as absolute numbers with percentages in parentheses. OR: odds ratio; CI: confidence interval. Univariate analysis is based on the χ2 test. Multivariate analysis is adjusted by gender and age. P ≤ 0.05 is considered as significant.
Allele and genotype frequencies of the ITGA4 −269A/C and +3061A/G polymorphism in APOE-ε4-negative AD patients and controls.
| SNP/model | Allele/genotype | AD subjects ( | Controls ( | Univariate analysis | Multivariate analysis | ||
|---|---|---|---|---|---|---|---|
|
| OR (95% CI) |
| OR (95% CI) | ||||
| −269 C/A | C | 106 (81.54%) | 271 (82.12%) | — | — | — | — |
| A | 24 (18.46%) | 59 (17.88%) | 0.88 | 1.04 (0.62–0.76) | — | — | |
|
| |||||||
| Codominant | CC | 41 (63.08%) | 106 (64.24%) | 1.00 | 1.00 | ||
| CA | 24 (36.92%) | 59 (35.76%) | 0.87 | 1.05 (0.58–1.91) | 1.00 | 1.00 (0.54–1.85) | |
| AA | 0 (00.00%) | 0 (00.00%) | — | — | — | — | |
|
| |||||||
| Dominant | CC | 41 (63.08%) | 106 (64.24%) | 1.00 | 1.00 | ||
| CA + AA | 24 (36.92%) | 59 (35.76%) | 0.87 | 1.05 (0.58–1.91) | 1.00 | 1.00 (0.54–1.85) | |
|
| |||||||
| Recessive | CC + CA | 65 (100.00%) | 165 (100.00%) | — | — | — | — |
| AA | 0 (00.00%) | 0 (00.00%) | — | — | — | — | |
|
| |||||||
| +3061 A/G | A | 82 (63.08%) | 237 (71.82%) | — | — | — | — |
| G | 48 (36.92%) | 93 (28.18%) | 0.07 | 1.49 (0.97–2.29) | — | — | |
|
| |||||||
| Codominant | AA | 22 (33.85%) | 88 (53.33%) | 1.00 | 1.00 | ||
| AG | 38 (58.46%) | 61 (36.97%) |
| 2.49 (1.34–4.62) |
| 2.37 (1.26–4.48) | |
| GG | 5 (7.69%) | 16 (9.70%) | — | 1.25 (0.41–3.78) | — | 1.34 (0.43–4.20) | |
|
| |||||||
| Dominant | AA | 22 (33.85%) | 88 (53.33%) | 1.00 | 1.00 | ||
| AG + GG | 43 (66.15%) | 77 (46.67%) |
| 2.23 (1.23–4.06) |
| 2.18 (1.18–4.03) | |
|
| |||||||
| Recessive | AA + AG | 60 (92.31%) | 149 (90.30%) | 1.00 | 1.00 | ||
| GG | 5 (7.69%) | 16 (9.70%) | 0.63 | 0.78 (0.27–2.21) | 0.77 | 0.85 (0.29–2.50) | |
|
| |||||||
| Overdominant | AA + GG | 27 (41.54%) | 104 (63.03%) | 1.00 | 1.00 | ||
| AG | 38 (58.46%) | 61 (36.97%) |
| 2.40 (1.34–4.31) |
| 2.26 (1.24–4.12) | |
|
| |||||||
| Haplotypes | CA | 56.88% | 63.97% | 1.00 | 1.00 | ||
| CG | 24.66% | 18.15% | 0.14 | 1.55 (0.87–2.75) | 0.17 | 1.51 (0.84–2.72) | |
| AG | 12.26% | 10.03% | 0.42 | 1.37 (0.63–2.96) | 0.40 | 1.40 (0.64–3.06) | |
| AA | 6.20% | 7.85% | 0.87 | 0.91 (0.30–2.77) | 0.67 | 0.78 (0.25–2.45) | |
Allele and genotype frequencies are presented as absolute numbers with percentages in parentheses. OR: odds ratio; CI: confidence interval. Univariate analysis is based on the χ2 test. Multivariate analysis is adjusted by gender and age. ∗P ≤ 0.05 is considered as significant.