Literature DB >> 29760531

The reactivity-driven biochemical mechanism of covalent KRASG12C inhibitors.

Rasmus Hansen1, Ulf Peters1, Anjali Babbar1, Yuching Chen1, Jun Feng1, Matthew R Janes1, Lian-Sheng Li1, Pingda Ren1,2, Yi Liu1,2, Patrick P Zarrinkar3.   

Abstract

Activating mutations in KRAS are among the most common tumor driver mutations. Until recently, KRAS had been considered undruggable with small molecules; the discovery of the covalent KRASG12C inhibitors ARS-853 and ARS-1620 has demonstrated that it is feasible to inhibit KRAS with high potency in cells and animals. Although the biological activity of these inhibitors has been described, the biochemical mechanism of how the compounds achieve potent inhibition remained incompletely understood. We now show that the activity of ARS-853 and ARS-1620 is primarily driven by KRAS-mediated catalysis of the chemical reaction with Cys12 in human KRASG12C, while the reversible binding affinity is weak, in the hundreds of micromolar or higher range. The mechanism resolves how an induced, shallow and dynamic pocket not expected to support high-affinity binding of small molecules can nevertheless be targeted with potent inhibitors and may be applicable to other targets conventionally considered undruggable.

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Year:  2018        PMID: 29760531     DOI: 10.1038/s41594-018-0061-5

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  30 in total

Review 1.  Covalent Inhibition in Drug Discovery.

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Journal:  ChemMedChem       Date:  2019-03-26       Impact factor: 3.466

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3.  Chemical acylation of an acquired serine suppresses oncogenic signaling of K-Ras(G12S).

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Journal:  Nat Chem Biol       Date:  2022-07-21       Impact factor: 16.174

4.  Inhibition of RAS: proven and potential vulnerabilities.

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Journal:  Biochem Soc Trans       Date:  2020-10-30       Impact factor: 5.407

5.  Discovery of covalent enzyme inhibitors using virtual docking of covalent fragments.

Authors:  Sandipan Roy Chowdhury; Steven Kennedy; Kai Zhu; Rama Mishra; Patrick Chuong; Alyssa-Uyen Nguyen; Stefan G Kathman; Alexander V Statsyuk
Journal:  Bioorg Med Chem Lett       Date:  2018-11-09       Impact factor: 2.823

6.  Precedence and Promise of Covalent Inhibitors of EGFR and KRAS for Patients with Non-Small-Cell Lung Cancer.

Authors:  Hengmiao Cheng; Simon Planken
Journal:  ACS Med Chem Lett       Date:  2018-08-02       Impact factor: 4.345

7.  Drugging the undruggable: a computational chemist's view of KRASG12C.

Authors:  Michael S Bodnarchuk; Doyle J Cassar; Jason G Kettle; Graeme Robb; Richard A Ward
Journal:  RSC Med Chem       Date:  2021-03-29

8.  Bifunctional Small-Molecule Ligands of K-Ras Induce Its Association with Immunophilin Proteins.

Authors:  Ziyang Zhang; Kevan M Shokat
Journal:  Angew Chem Int Ed Engl       Date:  2019-09-26       Impact factor: 16.823

Review 9.  Emerging strategies to target RAS signaling in human cancer therapy.

Authors:  Kun Chen; Yalei Zhang; Ling Qian; Peng Wang
Journal:  J Hematol Oncol       Date:  2021-07-23       Impact factor: 17.388

Review 10.  Anaphylaxis to drugs: Overcoming mast cell unresponsiveness by fake antigens.

Authors:  Werner J Pichler
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