Literature DB >> 29757293

A Rapid and Facile Pipeline for Generating Genomic Point Mutants in C. elegans Using CRISPR/Cas9 Ribonucleoproteins.

Harriet Prior1, Lauren MacConnachie1, Jose L Martinez1, Georgina C B Nicholl1, Asim A Beg2.   

Abstract

The clustered regularly interspersed palindromic repeats (CRISPR)-CRISPR-associated protein 9 (Cas9) prokaryotic adaptive immune defense system has been co-opted as a powerful tool for precise eukaryotic genome engineering. Here, we present a rapid and simple method using chimeric single guide RNAs (sgRNA) and CRISPR-Cas9 Ribonucleoproteins (RNPs) for the efficient and precise generation of genomic point mutations in C. elegans. We describe a pipeline for sgRNA target selection, homology-directed repair (HDR) template design, CRISPR-Cas9-RNP complexing and delivery, and a genotyping strategy that enables the robust and rapid identification of correctly edited animals. Our approach not only permits the facile generation and identification of desired genomic point mutant animals, but also facilitates the detection of other complex indel alleles in approximately 4 - 5 days with high efficiency and a reduced screening workload.

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Year:  2018        PMID: 29757293      PMCID: PMC6101052          DOI: 10.3791/57518

Source DB:  PubMed          Journal:  J Vis Exp        ISSN: 1940-087X            Impact factor:   1.355


  18 in total

Review 1.  Genome editing. The new frontier of genome engineering with CRISPR-Cas9.

Authors:  Jennifer A Doudna; Emmanuelle Charpentier
Journal:  Science       Date:  2014-11-28       Impact factor: 47.728

Review 2.  Delivery technologies for genome editing.

Authors:  Hao Yin; Kevin J Kauffman; Daniel G Anderson
Journal:  Nat Rev Drug Discov       Date:  2017-03-24       Impact factor: 84.694

3.  CRISPR-Cas9-Guided Genome Engineering in C. elegans.

Authors:  Hyun-Min Kim; Monica P Colaiácovo
Journal:  Curr Protoc Mol Biol       Date:  2016-07-01

Review 4.  Amyotrophic lateral sclerosis.

Authors:  Albert C Ludolph; Johannes Brettschneider; Jochen H Weishaupt
Journal:  Curr Opin Neurol       Date:  2012-10       Impact factor: 5.710

5.  A comprehensive assessment of the SOD1G93A low-copy transgenic mouse, which models human amyotrophic lateral sclerosis.

Authors:  Abraham Acevedo-Arozena; Bernadett Kalmar; Shafa Essa; Thomas Ricketts; Peter Joyce; Rosie Kent; Claire Rowe; Andy Parker; Anna Gray; Majid Hafezparast; Julian R Thorpe; Linda Greensmith; Elizabeth M C Fisher
Journal:  Dis Model Mech       Date:  2011-05-02       Impact factor: 5.758

6.  A Balanced Look at the Implications of Genomic (and Other "Omics") Testing for Disease Diagnosis and Clinical Care.

Authors:  Scott D Boyd; Stephen J Galli; Iris Schrijver; James L Zehnder; Euan A Ashley; Jason D Merker
Journal:  Genes (Basel)       Date:  2014-09-01       Impact factor: 4.096

7.  Precision genome editing using CRISPR-Cas9 and linear repair templates in C. elegans.

Authors:  Alexandre Paix; Andrew Folkmann; Geraldine Seydoux
Journal:  Methods       Date:  2017-04-07       Impact factor: 3.608

8.  Efficient gene transfer in C.elegans: extrachromosomal maintenance and integration of transforming sequences.

Authors:  C C Mello; J M Kramer; D Stinchcomb; V Ambros
Journal:  EMBO J       Date:  1991-12       Impact factor: 11.598

Review 9.  CRISPR-Based Methods for Caenorhabditis elegans Genome Engineering.

Authors:  Daniel J Dickinson; Bob Goldstein
Journal:  Genetics       Date:  2016-03       Impact factor: 4.562

10.  Highly Efficient, Rapid and Co-CRISPR-Independent Genome Editing in Caenorhabditis elegans.

Authors:  Harriet Prior; Ali K Jawad; Lauren MacConnachie; Asim A Beg
Journal:  G3 (Bethesda)       Date:  2017-11-06       Impact factor: 3.154

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