Literature DB >> 27366893

CRISPR-Cas9-Guided Genome Engineering in C. elegans.

Hyun-Min Kim1, Monica P Colaiácovo1.   

Abstract

The CRISPR (clustered regularly interspaced short palindromic repeats)-Cas (CRISPR-associated) system is successfully being used for efficient and targeted genome editing in various organisms, including the nematode C. elegans. Recent studies have developed various CRISPR-Cas9 approaches to enhance genome engineering via two major DNA double-strand break repair pathways: non-homologous end joining and homologous recombination. Here we describe a protocol for Cas9-mediated C. elegans genome editing together with single guide RNA (sgRNA) and repair template cloning, as well as injection methods required for delivering Cas9, sgRNAs, and repair template DNA into the C. elegans germline. © 2016 by John Wiley & Sons, Inc.
Copyright © 2016 John Wiley & Sons, Inc.

Entities:  

Keywords:  C. elegans; CRISPR; CRISPR-Cas; Cas9; genome editing; genome engineering

Mesh:

Substances:

Year:  2016        PMID: 27366893      PMCID: PMC4932911          DOI: 10.1002/cpmb.7

Source DB:  PubMed          Journal:  Curr Protoc Mol Biol        ISSN: 1934-3647


  22 in total

Review 1.  Maintenance of C. elegans.

Authors:  Theresa Stiernagle
Journal:  WormBook       Date:  2006-02-11

2.  Streamlined Genome Engineering with a Self-Excising Drug Selection Cassette.

Authors:  Daniel J Dickinson; Ariel M Pani; Jennifer K Heppert; Christopher D Higgins; Bob Goldstein
Journal:  Genetics       Date:  2015-06-03       Impact factor: 4.562

3.  Dramatic enhancement of genome editing by CRISPR/Cas9 through improved guide RNA design.

Authors:  Behnom Farboud; Barbara J Meyer
Journal:  Genetics       Date:  2015-02-18       Impact factor: 4.562

4.  Efficient marker-free recovery of custom genetic modifications with CRISPR/Cas9 in Caenorhabditis elegans.

Authors:  Joshua A Arribere; Ryan T Bell; Becky X H Fu; Karen L Artiles; Phil S Hartman; Andrew Z Fire
Journal:  Genetics       Date:  2014-08-26       Impact factor: 4.562

5.  CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III.

Authors:  Elitza Deltcheva; Krzysztof Chylinski; Cynthia M Sharma; Karine Gonzales; Yanjie Chao; Zaid A Pirzada; Maria R Eckert; Jörg Vogel; Emmanuelle Charpentier
Journal:  Nature       Date:  2011-03-31       Impact factor: 49.962

6.  Improved Mos1-mediated transgenesis in C. elegans.

Authors:  Christian Frøkjær-Jensen; M Wayne Davis; Michael Ailion; Erik M Jorgensen
Journal:  Nat Methods       Date:  2012-01-30       Impact factor: 28.547

7.  DNA Damage Sensitivity Assays in Caenorhabditis elegans.

Authors:  Hyun-Min Kim; Monica P Colaiácovo
Journal:  Bio Protoc       Date:  2015-06-05

8.  Heritable genome editing in C. elegans via a CRISPR-Cas9 system.

Authors:  Ari E Friedland; Yonatan B Tzur; Kevin M Esvelt; Monica P Colaiácovo; George M Church; John A Calarco
Journal:  Nat Methods       Date:  2013-06-30       Impact factor: 28.547

9.  Rapid and precise engineering of the Caenorhabditis elegans genome with lethal mutation co-conversion and inactivation of NHEJ repair.

Authors:  Jordan D Ward
Journal:  Genetics       Date:  2014-12-09       Impact factor: 4.562

10.  Scalable and versatile genome editing using linear DNAs with microhomology to Cas9 Sites in Caenorhabditis elegans.

Authors:  Alexandre Paix; Yuemeng Wang; Harold E Smith; Chih-Yung S Lee; Deepika Calidas; Tu Lu; Jarrett Smith; Helen Schmidt; Michael W Krause; Geraldine Seydoux
Journal:  Genetics       Date:  2014-09-23       Impact factor: 4.562

View more
  3 in total

1.  A Rapid and Facile Pipeline for Generating Genomic Point Mutants in C. elegans Using CRISPR/Cas9 Ribonucleoproteins.

Authors:  Harriet Prior; Lauren MacConnachie; Jose L Martinez; Georgina C B Nicholl; Asim A Beg
Journal:  J Vis Exp       Date:  2018-04-30       Impact factor: 1.355

2.  Fanconi Anemia FANCM/FNCM-1 and FANCD2/FCD-2 Are Required for Maintaining Histone Methylation Levels and Interact with the Histone Demethylase LSD1/SPR-5 in Caenorhabditis elegans.

Authors:  Hyun-Min Kim; Sara E Beese-Sims; Monica P Colaiácovo
Journal:  Genetics       Date:  2018-03-27       Impact factor: 4.562

3.  Precision genome editing using CRISPR-Cas9 and linear repair templates in C. elegans.

Authors:  Alexandre Paix; Andrew Folkmann; Geraldine Seydoux
Journal:  Methods       Date:  2017-04-07       Impact factor: 3.608

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.