| Literature DB >> 29755749 |
Katarzyna Ostrowska1, Davide Ceresoli2, Katarzyna Stadnicka1, Marlena Gryl1, Marco Cazzaniga2, Raffaella Soave2, Bogdan Musielak1, Łukasz J Witek1, Piotr Goszczycki1, Jarosław Grolik1, Andrzej M Turek1.
Abstract
The structural origin of absorption and fluorescence anisotropy of the single crystal of the π-conjugated heterocyclic system al">5,6,10b-tri-aza-acephenan-thrylene, <span class="Chemical">TAAP, is presented in this study. X-ray analysis shows that the crystal framework in the space group P [Formula: see text] is formed by centrosymmetric dimers of face-to-face mutually oriented TAAP molecules joined by π-π non-covalent interactions. The conformation of the TAAP molecule is stabilized by intramolecular C-H⋯N(sp2), N(sp2)H⋯π(CN), and C-H⋯O(sp2) hydrogen bonds. The presence of weak π-π interactions is confirmed by quantum theory of atoms in molecules (QTAIM) and non-covalent interaction (NCI) analysis. The analysis of the optical spectra of TAAP in solution and in the solid state does not allow the specification of the aggregation type. DFT calculations for the dimer in the gas phase indicate that the lowest singlet excitation is forbidden by symmetry, suggesting H-type aggregation, even though the overall absorption spectrum is bathochromically shifted as for the J-type. The experimental determination of the permanent dipole moment of a TAAP molecule in 1,4-dioxane solution indicates the presence of the monomer form. The calculated absorption and emission spectra of the crystal in a simple approximation are consistent with the experimentally determined orientation of the absorption and emission transition dipole moments in TAAP single crystals. The electrostatic interaction between monomers with a permanent dipole moment (ca 4 D each) could result in the unusual spectroscopic JH-aggregate behaviour of the TAAP dimer.Entities:
Keywords: JH aggregates; anisotropy; fluorescence; hydrogen bonding; optical materials; transition dipole moments; triazaacephenanthrylene (TAAP); π–π interactions
Year: 2018 PMID: 29755749 PMCID: PMC5929379 DOI: 10.1107/S2052252518001987
Source DB: PubMed Journal: IUCrJ ISSN: 2052-2525 Impact factor: 4.769
Figure 1Jablonski diagram for H- and J-type aggregates of the π-dimer with a centre of inversion (allowed absorption in blue, forbidden absorption in green and emission in red).
Figure 2Zwitterionic resonance structures of TAAP.
Figure 3The molecular structure of TAAP (a) with the relevant atom-numbering scheme. The non-hydrogen atoms are represented as displacement ellipsoids plotted at the 30% probability level. (b) Side-by-side arrangement of two neighbouring chromophores with an interplanar distance of 3.413 Å. Intramolecular hydrogen bonds and the gravity centre distance are marked by dashed lines. (c) Packing scheme along [10]. Gravity-centre-to-gravity-centre distance for planar chromophores in the dimer is marked by a turquoize line. H atoms have been omitted for clarity and the unit cell is marked by a black line.
Figure 4Molecular graph of TAAP with marked critical points: bond critical points (bcp), ring critical points (rcp) and cage critical points (ccp): (a) showing a side view and (b) a top view. NCI analysis of the intramolecular interactions in the TAAP dimer: (c) showing a side view and (d) a top view. The blue colour on the plot represents the bonding interaction region, green surfaces represent van der Waals interactions and red surfaces are the non-bonding regions.
Figure 5Microscopic images of a TAAP single crystal with the dimensions 0.28 × 0.13 × 0.06 mm obtained for (a) crossed polarizers (yellow lines indicate the polarization direction of Nicols); for two different angular orientations of the polarizer producing (b) the red colour (ca [110]) and (c) the yellow colour (ca [10]) of the crystal, respectively; positions for the crystal illuminated by the light of a UV-LED diode (λex = 410 nm) (yellow lines indicate the analyser direction for fluorescence observation) showing (d) lack of emission and (e) maximum intensity of emission.
Figure 6(a) View of the TAAP crystal structure at RT projected onto the (001) plane, parallel to the largest face of the crystal used for the fluorescence experiment (H atoms and phenyl rings at C3 and C5 have been omitted for clarity and displacement ellipsoids are drawn at the 30% probability level). The maximum fluorescence was observed with the analyzer approximately along [110]; the distances between gravity centres of molecules in the dimer (3.495 Å for TAAP_RT and 3.417 Å for TAAP_LT) are shown as turquoise lines. The orientation of the polarizers (compare with Fig. 5 ▸), approximately along [10] and [110], are marked by red lines. (b) Normalized absorption and fluorescence spectra for the solution of TAAP in toluene (solid line) and for the TAAP polycrystalline sample (double-dashed line). (c) The fluorescence three-dimensional image of the TAAP single crystal (λex = 405 nm). Inset: fluorescence spectrum for a TAAP single crystal (λex = 405 nm).
Figure 7(a) Normalized absorption spectra of TAAP in toluene, CHCl3, THF, CH3CN and DMSO. (b) Normalized fluorescence spectra (to the height of the band at 561 nm) at various concentrations of TAAP in toluene (λex = 440 nm) and fluorescence spectrum of TAAP in the crystalline state (red line, λex = 350 nm).
Figure 8(a) Absorption spectra of the TAAP monomer in the gas phase, computed at the TD-DFT/B3LYP level (shifted by −0.33 eV), compared to the experimental absorption spectra of TAAP in toluene (50 µM). (b) Absorption spectra of the TAAP monomer and dimer in the gas phase, computed at the TD-DFT/B3LYP level (shifted by −0.33 eV).
Low-lying optical transitions (singlets only) of the TAAP monomer in the gas phase, calculated at the TD-DFT/B3LYP level. The transition wavelengths (λs) are obtained after shifting the TD-DFT transition energies by −0.33 eV (∊s). H is the highest occupied molecular orbital (HOMO) and L is the lowest unoccupied molecular orbital (LUMO). β is the angle between the direction of the permanent dipole moment (PDM) and the transition dipole moment (TDM)
| Ex. state | ∊s (eV) | λs (nm) | Oscillator strength | Dominant trans. (coeff) | Character | TDM (Debye) | β (°) | γ (°) | Best cryst. direction |
|---|---|---|---|---|---|---|---|---|---|
|
| 2.46 | 503 | 0.0726 | H→L (0.64) | ( | 2.62 | 19.43 | 4.35 | [ |
|
| 2.77 | 447 | 0.1424 | H-1→L (0.63) |
| 3.48 | 59.92 | 0.34 | [ |
|
| 3.10 | 400 | 0.0329 | H-2→L (0.66) |
| 1.59 | 30.23 | 6.90 | [3 |
|
| 3.29 | 377 | 0.0160 | H-3→L (0.61) |
| 0.96 | 30.23 | 2.54 | [2 |
| … | … | … | … | … | … | … | … | … | ... |
|
| 3.52 | 352 | 0.1114 | H-6→L (0.20), H-1→L+1 (0.43), H→L+1 (0.40) |
| 2.78 | 71.95 | 0.68 | [ |
Low-lying optical transitions (singlets only) of the TAAP dimer in the gas phase, calculated at the TD-DFT/B3LYP level. The transition wavelengths (λs) are obtained after shifting the TD-DFT transition energies by −0.33 eV (∊s). H is the HOMO and L is the LUMO. β is the angle between the direction of the permanent dipole moment (PDM) and the transition dipole moment (TDM). γ is the complementary angle between the TDM and the normal to the plane of the molecule. θ is the angle between the TDM and the vector connecting the centre of mass of the two molecules in the dimer, n.d. is not defined
| Ex. state | ∊s (eV) | λs (nm) | Oscillator strength | Dominant trans. (coeff) | Character | TDM (Debye) | β (°) | θ (°) | γ (°) | Ex. state |
|---|---|---|---|---|---|---|---|---|---|---|
|
| 2.32 | 553 | 0 | H→L+1 (0.67) |
| 0 | n.d. | n.d. | n.d. | n.d. |
|
| 2.34 | 529 | 0.0225 | H→L (0.62) |
| 1.49 | 34.08 | 54.22 | 2.63 | [ |
|
| 2.40 | 517 | 0 | H-1→L (0.66) |
| 0 | n.d. | n.d. | n.d. | n.d. |
|
| 2.41 | 515 | 0.0709 | H-1→L+1 (0.61) |
| 2.61 | 12.17 | 67.62 | 5.98 | [ |
|
| 2.65 | 468 | 0 | H-2→L+1 (0.68) |
| 0 | n.d. | n.d. | n.d. | n.d. |
|
| 2.66 | 466 | 0.0131 | H-2→L (0.66) |
| 1.07 | 86.51 | 72.84 | 25.38 | [31 |
|
| 2.71 | 457 | 0 | H-3→L (0.68) |
| 0 | n.d. | n.d. | n.d. | n.d. |
|
| 2.77 | 447 | 0.2000 | H-3→L+1 (0.63) |
| 4.12 | 58.9 | 32.29 | 8.46 | [ |
Figure 9(a) 1H NMR spectra of TAAP in CDCl3, CD2Cl2, THF-d 8, dioxane-d 8, toluene-d 8 and benzene-d 6. (b) 1H DOSY NMR spectrum of TAAP in CDCl3. (c) 1H DOSY NMR spectrum of TAAP in tetrachloroethane-d 2 at 345 K.
Figure 10The orientation of the calculated transition dipole moments (TDMs) for (a) the TAAP monomer and (b) the TAAP dimer in relation to both the chromophore plane and the crystallographic plane (001). All TDMs except S 8 of the monomer and S 3 of the dimer are approximately aligned along the [10] direction.
Figure 11(a) Calculated absorption spectra of the dimer as a function of the photon polarization axis. (b) Perceived colour for the polarization axis at −45° against the b-crystallographic direction in the (001) plane (orange–red). (c) Perceived colour for the polarization axis at +45° (yellow). The crystallographic and polarizer directions are the same as in Fig. 5 ▸.
Figure 12Comparison of the calculated spectra of the TAAP crystal in the Clausius–Mossotti approximation with the experimental spectra.