Literature DB >> 29738986

Neural data science: accelerating the experiment-analysis-theory cycle in large-scale neuroscience.

L Paninski1, J P Cunningham2.   

Abstract

Modern large-scale multineuronal recording methodologies, including multielectrode arrays, calcium imaging, and optogenetic techniques, produce single-neuron resolution data of a magnitude and precision that were the realm of science fiction twenty years ago. The major bottlenecks in systems and circuit neuroscience no longer lie in simply collecting data from large neural populations, but also in understanding this data: developing novel scientific questions, with corresponding analysis techniques and experimental designs to fully harness these new capabilities and meaningfully interrogate these questions. Advances in methods for signal processing, network analysis, dimensionality reduction, and optimal control-developed in lockstep with advances in experimental neurotechnology-promise major breakthroughs in multiple fundamental neuroscience problems. These trends are clear in a broad array of subfields of modern neuroscience; this review focuses on recent advances in methods for analyzing neural time-series data with single-neuronal precision.
Copyright © 2018 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2018        PMID: 29738986     DOI: 10.1016/j.conb.2018.04.007

Source DB:  PubMed          Journal:  Curr Opin Neurobiol        ISSN: 0959-4388            Impact factor:   6.627


  21 in total

Review 1.  Two views on the cognitive brain.

Authors:  David L Barack; John W Krakauer
Journal:  Nat Rev Neurosci       Date:  2021-04-15       Impact factor: 34.870

Review 2.  Computation Through Neural Population Dynamics.

Authors:  Saurabh Vyas; Matthew D Golub; David Sussillo; Krishna V Shenoy
Journal:  Annu Rev Neurosci       Date:  2020-07-08       Impact factor: 12.449

Review 3.  Interpreting encoding and decoding models.

Authors:  Nikolaus Kriegeskorte; Pamela K Douglas
Journal:  Curr Opin Neurobiol       Date:  2019-04-28       Impact factor: 6.627

Review 4.  Cracking the Function of Layers in the Sensory Cortex.

Authors:  Hillel Adesnik; Alexander Naka
Journal:  Neuron       Date:  2018-12-05       Impact factor: 17.173

5.  Characterizing the nonlinear structure of shared variability in cortical neuron populations using latent variable models.

Authors:  Matthew R Whiteway; Karolina Socha; Vincent Bonin; Daniel A Butts
Journal:  Neuron Behav Data Anal Theory       Date:  2019-04-27

6.  Neuroscience Cloud Analysis As a Service: An open-source platform for scalable, reproducible data analysis.

Authors:  Taiga Abe; Ian Kinsella; Shreya Saxena; E Kelly Buchanan; Joao Couto; John Briggs; Sian Lee Kitt; Ryan Glassman; John Zhou; Liam Paninski; John P Cunningham
Journal:  Neuron       Date:  2022-07-22       Impact factor: 18.688

Review 7.  A roadmap to integrate astrocytes into Systems Neuroscience.

Authors:  Ksenia V Kastanenka; Rubén Moreno-Bote; Maurizio De Pittà; Gertrudis Perea; Abel Eraso-Pichot; Roser Masgrau; Kira E Poskanzer; Elena Galea
Journal:  Glia       Date:  2019-05-06       Impact factor: 7.452

8.  Interrogating theoretical models of neural computation with emergent property inference.

Authors:  Sean R Bittner; Agostina Palmigiano; Alex T Piet; Chunyu A Duan; Carlos D Brody; Kenneth D Miller; John Cunningham
Journal:  Elife       Date:  2021-07-29       Impact factor: 8.140

9.  Identification and quantification of neuronal ensembles in optical imaging experiments.

Authors:  Michael Wenzel; Jordan P Hamm
Journal:  J Neurosci Methods       Date:  2020-12-24       Impact factor: 2.390

Review 10.  Improving scalability in systems neuroscience.

Authors:  Zhe Sage Chen; Bijan Pesaran
Journal:  Neuron       Date:  2021-04-07       Impact factor: 18.688

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.