Literature DB >> 29736714

Discovery of Modulators of Adipocyte Physiology Using Fully Functionalized Fragments.

Andrea Galmozzi1, Christopher G Parker2, Bernard P Kok2, Benjamin F Cravatt2, Enrique Saez2.   

Abstract

Defects in adipocyte function associated with obesity drive the development of systemic insulin resistance and type 2 diabetes. Agents that correct obesity-linked adipocyte dysfunction serve as useful insulin sensitizers in humans, as is exemplified by the thiazolidinediones (TZDs). We have developed a new platform that integrates advanced chemoproteomics with phenotypic screening to identify small molecules that promote differentiation and lipid storage in adipocytes, and, in tandem, their molecular target(s). These molecules mimic the activity of TZDs in culture and thus may also serve as insulin sensitizers in vivo. Central to this platform is the use of fully functionalized fragment (FFF) probes that consist of a variable, fragment-like recognition element linked to an alkyne-diazirine group that enables the photoactivated capture of probe-bound proteins directly in living cells and subsequent copper-catalyzed azide-alkyne cycloaddition to reporter tags for enrichment and identification of these probe-bound proteins by mass spectrometry. This platform, which can be adapted to diverse screens and cell types beyond adipocytes, has the potential to uncover new biological pathways amenable to pharmacological modulation that may impact human disease.

Entities:  

Keywords:  Adipogenesis; Adipose tissue; Chemical proteomics; Phenotypic screening; Photoreactive small molecules; Target identification

Mesh:

Substances:

Year:  2018        PMID: 29736714      PMCID: PMC6010189          DOI: 10.1007/978-1-4939-7847-2_9

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  14 in total

1.  Fully functionalized small-molecule probes for integrated phenotypic screening and target identification.

Authors:  Justin S Cisar; Benjamin F Cravatt
Journal:  J Am Chem Soc       Date:  2012-06-13       Impact factor: 15.419

2.  Stable-isotope dimethyl labeling for quantitative proteomics.

Authors:  Jue-Liang Hsu; Sheng-Yu Huang; Nan-Haw Chow; Shu-Hui Chen
Journal:  Anal Chem       Date:  2003-12-15       Impact factor: 6.986

3.  Large-scale analysis of the yeast proteome by multidimensional protein identification technology.

Authors:  M P Washburn; D Wolters; J R Yates
Journal:  Nat Biotechnol       Date:  2001-03       Impact factor: 54.908

Review 4.  What we talk about when we talk about fat.

Authors:  Evan D Rosen; Bruce M Spiegelman
Journal:  Cell       Date:  2014-01-16       Impact factor: 41.582

Review 5.  Lipid-induced insulin resistance: unravelling the mechanism.

Authors:  Varman T Samuel; Kitt Falk Petersen; Gerald I Shulman
Journal:  Lancet       Date:  2010-06-26       Impact factor: 79.321

6.  Ligand and Target Discovery by Fragment-Based Screening in Human Cells.

Authors:  Christopher G Parker; Andrea Galmozzi; Yujia Wang; Bruno E Correia; Kenji Sasaki; Christopher M Joslyn; Arthur S Kim; Cullen L Cavallaro; R Michael Lawrence; Stephen R Johnson; Iñigo Narvaiza; Enrique Saez; Benjamin F Cravatt
Journal:  Cell       Date:  2017-01-19       Impact factor: 41.582

7.  Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics.

Authors:  Shao-En Ong; Blagoy Blagoev; Irina Kratchmarova; Dan Bach Kristensen; Hanno Steen; Akhilesh Pandey; Matthias Mann
Journal:  Mol Cell Proteomics       Date:  2002-05       Impact factor: 5.911

Review 8.  Target identification and mechanism of action in chemical biology and drug discovery.

Authors:  Monica Schenone; Vlado Dančík; Bridget K Wagner; Paul A Clemons
Journal:  Nat Chem Biol       Date:  2013-04       Impact factor: 15.040

Review 9.  Targeting adipose tissue in the treatment of obesity-associated diabetes.

Authors:  Christine M Kusminski; Perry E Bickel; Philipp E Scherer
Journal:  Nat Rev Drug Discov       Date:  2016-06-03       Impact factor: 84.694

10.  Integrated phenotypic and activity-based profiling links Ces3 to obesity and diabetes.

Authors:  Eduardo Dominguez; Andrea Galmozzi; Jae Won Chang; Ku-Lung Hsu; Joanna Pawlak; Weiwei Li; Cristina Godio; Jason Thomas; David Partida; Sherry Niessen; Paul E O'Brien; Aaron P Russell; Matthew J Watt; Daniel K Nomura; Benjamin F Cravatt; Enrique Saez
Journal:  Nat Chem Biol       Date:  2013-12-22       Impact factor: 15.040

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