Literature DB >> 29725916

SegAN: Adversarial Network with Multi-scale L1 Loss for Medical Image Segmentation.

Yuan Xue1, Tao Xu2, Han Zhang3, L Rodney Long4, Xiaolei Huang2.   

Abstract

Inspired by classic Generative Adversarial Networks (GANs), we propose a novel end-to-end adversarial neural network, called SegAN, for the task of medical image segmentation. Since image segmentation requires dense, pixel-level labeling, the single scalar real/fake output of a classic GAN's discriminator may be ineffective in producing stable and sufficient gradient feedback to the networks. Instead, we use a fully convolutional neural network as the segmentor to generate segmentation label maps, and propose a novel adversarial critic network with a multi-scale L1 loss function to force the critic and segmentor to learn both global and local features that capture long- and short-range spatial relationships between pixels. In our SegAN framework, the segmentor and critic networks are trained in an alternating fashion in a min-max game: The critic is trained by maximizing a multi-scale loss function, while the segmentor is trained with only gradients passed along by the critic, with the aim to minimize the multi-scale loss function. We show that such a SegAN framework is more effective and stable for the segmentation task, and it leads to better performance than the state-of-the-art U-net segmentation method. We tested our SegAN method using datasets from the MICCAI BRATS brain tumor segmentation challenge. Extensive experimental results demonstrate the effectiveness of the proposed SegAN with multi-scale loss: on BRATS 2013 SegAN gives performance comparable to the state-of-the-art for whole tumor and tumor core segmentation while achieves better precision and sensitivity for Gd-enhance tumor core segmentation; on BRATS 2015 SegAN achieves better performance than the state-of-the-art in both dice score and precision.

Entities:  

Mesh:

Year:  2018        PMID: 29725916     DOI: 10.1007/s12021-018-9377-x

Source DB:  PubMed          Journal:  Neuroinformatics        ISSN: 1539-2791


  9 in total

1.  Deformable registration of glioma images using EM algorithm and diffusion reaction modeling.

Authors:  Ali Gooya; George Biros; Christos Davatzikos
Journal:  IEEE Trans Med Imaging       Date:  2010-09-27       Impact factor: 10.048

2.  Spatial decision forests for MS lesion segmentation in multi-channel magnetic resonance images.

Authors:  Ezequiel Geremia; Olivier Clatz; Bjoern H Menze; Ender Konukoglu; Antonio Criminisi; Nicholas Ayache
Journal:  Neuroimage       Date:  2011-04-08       Impact factor: 6.556

3.  A computational approach to edge detection.

Authors:  J Canny
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  1986-06       Impact factor: 6.226

4.  Brain Tumor Segmentation Using Convolutional Neural Networks in MRI Images.

Authors:  Sergio Pereira; Adriano Pinto; Victor Alves; Carlos A Silva
Journal:  IEEE Trans Med Imaging       Date:  2016-03-04       Impact factor: 10.048

5.  Segmenting brain tumors using pseudo-conditional random fields.

Authors:  Chi-Hoon Lee; Shaojun Wang; Albert Murtha; Matthew R G Brown; Russell Greiner
Journal:  Med Image Comput Comput Assist Interv       Date:  2008

6.  A discriminative model-constrained graph cuts approach to fully automated pediatric brain tumor segmentation in 3-D MRI.

Authors:  Michael Wels; Gustavo Carneiro; Alexander Aplas; Martin Huber; Joachim Hornegger; Dorin Comaniciu
Journal:  Med Image Comput Comput Assist Interv       Date:  2008

7.  Brain tumor segmentation with Deep Neural Networks.

Authors:  Mohammad Havaei; Axel Davy; David Warde-Farley; Antoine Biard; Aaron Courville; Yoshua Bengio; Chris Pal; Pierre-Marc Jodoin; Hugo Larochelle
Journal:  Med Image Anal       Date:  2016-05-19       Impact factor: 8.545

8.  Efficient multi-scale 3D CNN with fully connected CRF for accurate brain lesion segmentation.

Authors:  Konstantinos Kamnitsas; Christian Ledig; Virginia F J Newcombe; Joanna P Simpson; Andrew D Kane; David K Menon; Daniel Rueckert; Ben Glocker
Journal:  Med Image Anal       Date:  2016-10-29       Impact factor: 8.545

Review 9.  The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS).

Authors:  Bjoern H Menze; Andras Jakab; Stefan Bauer; Jayashree Kalpathy-Cramer; Keyvan Farahani; Justin Kirby; Yuliya Burren; Nicole Porz; Johannes Slotboom; Roland Wiest; Levente Lanczi; Elizabeth Gerstner; Marc-André Weber; Tal Arbel; Brian B Avants; Nicholas Ayache; Patricia Buendia; D Louis Collins; Nicolas Cordier; Jason J Corso; Antonio Criminisi; Tilak Das; Hervé Delingette; Çağatay Demiralp; Christopher R Durst; Michel Dojat; Senan Doyle; Joana Festa; Florence Forbes; Ezequiel Geremia; Ben Glocker; Polina Golland; Xiaotao Guo; Andac Hamamci; Khan M Iftekharuddin; Raj Jena; Nigel M John; Ender Konukoglu; Danial Lashkari; José Antonió Mariz; Raphael Meier; Sérgio Pereira; Doina Precup; Stephen J Price; Tammy Riklin Raviv; Syed M S Reza; Michael Ryan; Duygu Sarikaya; Lawrence Schwartz; Hoo-Chang Shin; Jamie Shotton; Carlos A Silva; Nuno Sousa; Nagesh K Subbanna; Gabor Szekely; Thomas J Taylor; Owen M Thomas; Nicholas J Tustison; Gozde Unal; Flor Vasseur; Max Wintermark; Dong Hye Ye; Liang Zhao; Binsheng Zhao; Darko Zikic; Marcel Prastawa; Mauricio Reyes; Koen Van Leemput
Journal:  IEEE Trans Med Imaging       Date:  2014-12-04       Impact factor: 10.048

  9 in total
  43 in total

Review 1.  Role of deep learning in infant brain MRI analysis.

Authors:  Mahmoud Mostapha; Martin Styner
Journal:  Magn Reson Imaging       Date:  2019-06-20       Impact factor: 2.546

2.  One-Shot Generative Adversarial Learning for MRI Segmentation of Craniomaxillofacial Bony Structures.

Authors:  Xu Chen; Chunfeng Lian; Li Wang; Hannah Deng; Steve H Fung; Dong Nie; Kim-Han Thung; Pew-Thian Yap; Jaime Gateno; James J Xia; Dinggang Shen
Journal:  IEEE Trans Med Imaging       Date:  2019-08-14       Impact factor: 10.048

3.  DRRNet: Dense Residual Refine Networks for Automatic Brain Tumor Segmentation.

Authors:  Jiawei Sun; Wei Chen; Suting Peng; Boqiang Liu
Journal:  J Med Syst       Date:  2019-06-08       Impact factor: 4.460

4.  Automated Segmentation of Tissues Using CT and MRI: A Systematic Review.

Authors:  Leon Lenchik; Laura Heacock; Ashley A Weaver; Robert D Boutin; Tessa S Cook; Jason Itri; Christopher G Filippi; Rao P Gullapalli; James Lee; Marianna Zagurovskaya; Tara Retson; Kendra Godwin; Joey Nicholson; Ponnada A Narayana
Journal:  Acad Radiol       Date:  2019-08-10       Impact factor: 3.173

5.  Adversarial Confidence Learning for Medical Image Segmentation and Synthesis.

Authors:  Dong Nie; Dinggang Shen
Journal:  Int J Comput Vis       Date:  2020-03-21       Impact factor: 7.410

6.  Generating sequential electronic health records using dual adversarial autoencoder.

Authors:  Dongha Lee; Hwanjo Yu; Xiaoqian Jiang; Deevakar Rogith; Meghana Gudala; Mubeen Tejani; Qiuchen Zhang; Li Xiong
Journal:  J Am Med Inform Assoc       Date:  2020-07-01       Impact factor: 4.497

7.  Synthetic image augmentation with generative adversarial network for enhanced performance in protein classification.

Authors:  Rohit Verma; Raj Mehrotra; Chinmay Rane; Ritu Tiwari; Arun Kumar Agariya
Journal:  Biomed Eng Lett       Date:  2020-07-13

8.  Incorporating prior shape knowledge via data-driven loss model to improve 3D liver segmentation in deep CNNs.

Authors:  Saeed Mohagheghi; Amir Hossein Foruzan
Journal:  Int J Comput Assist Radiol Surg       Date:  2019-11-04       Impact factor: 2.924

9.  Comparison of semi-automatic and deep learning-based automatic methods for liver segmentation in living liver transplant donors.

Authors:  A Emre Kavur; Naciye Sinem Gezer; Mustafa Barış; Yusuf Şahin; Savaş Özkan; Bora Baydar; Ulaş Yüksel; Çağlar Kılıkçıer; Şahin Olut; Gözde Bozdağı Akar; Gözde Ünal; Oğuz Dicle; M Alper Selver
Journal:  Diagn Interv Radiol       Date:  2020-01       Impact factor: 2.630

10.  Survival prediction of patients suffering from glioblastoma based on two-branch DenseNet using multi-channel features.

Authors:  Xue Fu; Chunxiao Chen; Dongsheng Li
Journal:  Int J Comput Assist Radiol Surg       Date:  2021-01-18       Impact factor: 2.924

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.