Literature DB >> 29720519

Glycan Binding Specificity and Mechanism of Human and Porcine P[6]/P[19] Rotavirus VP8*s.

Xiaoman Sun1,2, Dandi Li1,2, Jianxun Qi3, Wengang Chai4, Luyao Wang1,2, Lihong Wang1,2, Ruchao Peng3, Han Wang3, Qing Zhang1,2, Lili Pang1,2, Xiangyu Kong1,2, Hong Wang3, Miao Jin1,2, George F Gao3, Zhaojun Duan5,2.   

Abstract

Rotaviruses (RVs), which cause severe gastroenteritis in infants and children, recognize glycan ligands in a genotype-dependent manner via the distal VP8* head of the spike protein VP4. However, the glycan binding mechanisms remain elusive for the P[II] genogroup RVs, including the widely prevalent human RVs (P[8], P[4], and P[6]) and a rare P[19] RV. In this study, we characterized the glycan binding specificities of human and porcine P[6]/P[19] RV VP8*s and found that the P[II] genogroup RV VP8*s could commonly interact with mucin core 2, which may play an important role in RV evolution and cross-species transmission. We determined the first P[6] VP8* structure, as well as the complex structures of human P[19] VP8*, with core 2 and lacto-N-tetraose (LNT). A glycan binding site was identified in human P[19] VP8*. Structural superimposition and sequence alignment revealed the conservation of the glycan binding site in the P[II] genogroup RV VP8*s. Our data provide significant insight into the glycan binding specificity and glycan binding mechanism of the P[II] genogroup RV VP8*s, which could help in understanding RV evolution, transmission, and epidemiology and in vaccine development.IMPORTANCE Rotaviruses (RVs), belonging to the family Reoviridae, are double-stranded RNA viruses that cause acute gastroenteritis in children and animals worldwide. Depending on the phylogeny of the VP8* sequences, P[6] and P[19] RVs are grouped into genogroup II, together with P[4] and P[8], which are widely prevalent in humans. In this study, we characterized the glycan binding specificities of human and porcine P[6]/P[19] RV VP8*s, determined the crystal structure of P[6] VP8*, and uncovered the glycan binding pattern in P[19] VP8*, revealing a conserved glycan binding site in the VP8*s of P[II] genogroup RVs by structural superimposition and sequence alignment. Our data suggested that mucin core 2 may play an important role in P[II] RV evolution and cross-species transmission. These data provide insight into the cell attachment, infection, epidemiology, and evolution of P[II] genogroup RVs, which could help in developing control and prevention strategies against RVs.
Copyright © 2018 American Society for Microbiology.

Entities:  

Keywords:  P[19] rotavirus; P[6] rotavirus; VP8* structure; glycan binding specificity; lacto-N-tetraose (LNT); mucin core 2

Mesh:

Substances:

Year:  2018        PMID: 29720519      PMCID: PMC6026740          DOI: 10.1128/JVI.00538-18

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  46 in total

1.  Ganglioside GM(1a) on the cell surface is involved in the infection by human rotavirus KUN and MO strains.

Authors:  C T Guo; O Nakagomi; M Mochizuki; H Ishida; M Kiso; Y Ohta; T Suzuki; D Miyamoto; K I Hidari; Y Suzuki
Journal:  J Biochem       Date:  1999-10       Impact factor: 3.387

2.  Substantial Receptor-induced Structural Rearrangement of Rotavirus VP8*: Potential Implications for Cross-Species Infection.

Authors:  Xing Yu; Rahul Mishra; Gavan Holloway; Mark von Itzstein; Barbara S Coulson; Helen Blanchard
Journal:  Chembiochem       Date:  2015-09-03       Impact factor: 3.164

3.  Integrin-using rotaviruses bind alpha2beta1 integrin alpha2 I domain via VP4 DGE sequence and recognize alphaXbeta2 and alphaVbeta3 by using VP7 during cell entry.

Authors:  Kate L Graham; Peter Halasz; Yan Tan; Marilyn J Hewish; Yoshikazu Takada; Erich R Mackow; Martyn K Robinson; Barbara S Coulson
Journal:  J Virol       Date:  2003-09       Impact factor: 5.103

4.  Sialic acid dependence in rotavirus host cell invasion.

Authors:  Thomas Haselhorst; Fiona E Fleming; Jeffrey C Dyason; Regan D Hartnell; Xing Yu; Gavan Holloway; Kim Santegoets; Milton J Kiefel; Helen Blanchard; Barbara S Coulson; Mark von Itzstein
Journal:  Nat Chem Biol       Date:  2008-12-21       Impact factor: 15.040

5.  G and P types of circulating rotavirus strains in the United States during 1996-2005: nine years of prevaccine data.

Authors:  Jon R Gentsch; Jennifer J Hull; Elizabeth N Teel; Tara K Kerin; Molly M Freeman; Mathew D Esona; Dixie D Griffin; Brittany P Bielfelt-Krall; Krisztian Banyai; Baoming Jiang; Margaret M Cortese; Roger I Glass; Umesh D Parashar
Journal:  J Infect Dis       Date:  2009-11-01       Impact factor: 5.226

Review 6.  Molecular Epidemiology of Rotavirus in Children under Five in Africa (2006-2016): A Systematic Review.

Authors:  D Ouermi; D Soubeiga; W M C Nadembega; P M Sawadogo; T M Zohoncon; D Obiri-Yeboah; F W Djigma; J Nordgren; J Simpore
Journal:  Pak J Biol Sci       Date:  2017

7.  Global, Regional, and National Estimates of Rotavirus Mortality in Children <5 Years of Age, 2000-2013.

Authors:  Jacqueline E Tate; Anthony H Burton; Cynthia Boschi-Pinto; Umesh D Parashar
Journal:  Clin Infect Dis       Date:  2016-05-01       Impact factor: 9.079

8.  Structural basis of glycan specificity of P[19] VP8*: Implications for rotavirus zoonosis and evolution.

Authors:  Yang Liu; Shenyuan Xu; Andrew L Woodruff; Ming Xia; Ming Tan; Michael A Kennedy; Xi Jiang
Journal:  PLoS Pathog       Date:  2017-11-14       Impact factor: 6.823

9.  Rotavirus strain diversity in Eastern and Southern African countries before and after vaccine introduction.

Authors:  L M Seheri; N B Magagula; I Peenze; K Rakau; A Ndadza; J M Mwenda; G Weldegebriel; A D Steele; M J Mphahlele
Journal:  Vaccine       Date:  2017-12-02       Impact factor: 3.641

10.  Poly-LacNAc as an age-specific ligand for rotavirus P[11] in neonates and infants.

Authors:  Yang Liu; Pengwei Huang; Baoming Jiang; Ming Tan; Ardythe L Morrow; Xi Jiang
Journal:  PLoS One       Date:  2013-11-11       Impact factor: 3.240

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  13 in total

1.  Genetic susceptibility to rotavirus infection in Chinese children: a population-based case-control study.

Authors:  Jin-Xia Wang; Li-Na Chen; Can-Jing Zhang; Hong-Lu Zhou; Yan-Hong Zhang; Xin-Jiang Zhang; Zhi-Yong Hao; Chao Qiu; Jing-Chen Ma; Yu-Liang Zhao; Weiming Zhong; Ming Tan; Xi Jiang; Song-Mei Wang; Xuan-Yi Wang
Journal:  Hum Vaccin Immunother       Date:  2020-12-09       Impact factor: 3.452

2.  Structural Basis of Glycan Recognition in Globally Predominant Human P[8] Rotavirus.

Authors:  Xiaoman Sun; Lei Dang; Dandi Li; Jianxun Qi; Mengxuan Wang; Wengang Chai; Qing Zhang; Hong Wang; Ruixia Bai; Ming Tan; Zhaojun Duan
Journal:  Virol Sin       Date:  2019-10-16       Impact factor: 4.327

3.  Structural basis of P[II] rotavirus evolution and host ranges under selection of histo-blood group antigens.

Authors:  Shenyuan Xu; Kristen Rose McGinnis; Yang Liu; Pengwei Huang; Ming Tan; Michael Robert Stuckert; Riley Erin Burnside; Elsa Grace Jacob; Shuisong Ni; Xi Jiang; Michael A Kennedy
Journal:  Proc Natl Acad Sci U S A       Date:  2021-09-07       Impact factor: 11.205

4.  Glycan recognition in globally dominant human rotaviruses.

Authors:  Liya Hu; Banumathi Sankaran; Daniel R Laucirica; Ketki Patil; Wilhelm Salmen; Allan Chris M Ferreon; Phoebe S Tsoi; Yi Lasanajak; David F Smith; Sasirekha Ramani; Robert L Atmar; Mary K Estes; Josephine C Ferreon; B V Venkataram Prasad
Journal:  Nat Commun       Date:  2018-07-06       Impact factor: 14.919

Review 5.  Glycan Microarrays as Chemical Tools for Identifying Glycan Recognition by Immune Proteins.

Authors:  Chao Gao; Mohui Wei; Tanya R McKitrick; Alyssa M McQuillan; Jamie Heimburg-Molinaro; Richard D Cummings
Journal:  Front Chem       Date:  2019-12-13       Impact factor: 5.221

6.  The Functional Characterization of Bat and Human P[3] Rotavirus VP8*s.

Authors:  Dandi Li; Mengxuan Wang; Tongyao Mao; Mingwen Wang; Qing Zhang; Hong Wang; Lili Pang; Xiaoman Sun; Zhaojun Duan
Journal:  Virol Sin       Date:  2021-05-31       Impact factor: 4.327

Review 7.  Structural Basis of Glycan Recognition of Rotavirus.

Authors:  Xiaoman Sun; Dandi Li; Zhaojun Duan
Journal:  Front Mol Biosci       Date:  2021-07-08

8.  Molecular basis of P[II] major human rotavirus VP8* domain recognition of histo-blood group antigens.

Authors:  Shenyuan Xu; Luay U Ahmed; Michael Robert Stuckert; Kristen Rose McGinnis; Yang Liu; Ming Tan; Pengwei Huang; Weiming Zhong; Dandan Zhao; Xi Jiang; Michael A Kennedy
Journal:  PLoS Pathog       Date:  2020-03-24       Impact factor: 6.823

9.  Glycan binding patterns of human rotavirus P[10] VP8* protein.

Authors:  Li-Li Pang; Meng-Xuan Wang; Xiao-Man Sun; Yue Yuan; Yu Qing; Yan Xin; Jia-Yan Zhang; Dan-di Li; Zhao-Jun Duan
Journal:  Virol J       Date:  2018-10-19       Impact factor: 4.099

Review 10.  The Impact of Human Genetic Polymorphisms on Rotavirus Susceptibility, Epidemiology, and Vaccine Take.

Authors:  Sumit Sharma; Marie Hagbom; Lennart Svensson; Johan Nordgren
Journal:  Viruses       Date:  2020-03-17       Impact factor: 5.048

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