Literature DB >> 29707792

Maintenance of pre-existing DNA methylation states through recurring excess-light stress.

Diep R Ganguly1, Peter A Crisp2, Steven R Eichten1, Barry J Pogson1.   

Abstract

The capacity for plant stress priming and memory and the notion of this being underpinned by DNA methylation-mediated memory is an appealing hypothesis for which there is mixed evidence. We previously established a lack of drought-induced methylome variation in Arabidopsis thaliana (Arabidopsis); however, this was tied to only minor observations of physiological memory. There are numerous independent observations demonstrating that photoprotective mechanisms, induced by excess-light stress, can lead to robust programmable changes in newly developing leaf tissues. Although key signalling molecules and transcription factors are known to promote this priming signal, an untested question is the potential involvement of chromatin marks towards the maintenance of light stress acclimation, or memory. Thus, we systematically tested our previous hypothesis of a stress-resistant methylome using a recurring excess-light stress, then analysing new, emerging, and existing tissues. The DNA methylome showed negligible stress-associated variation, with the vast majority attributable to stochastic differences. Yet, photoacclimation was evident through enhanced photosystem II performance in exposed tissues, and nonphotochemical quenching and fluorescence decline ratio showed evidence of mitotic transmission. Thus, we have observed physiological acclimation in new and emerging tissues in the absence of substantive DNA methylome changes.
© 2018 John Wiley & Sons Ltd.

Entities:  

Keywords:  Arabidopsis thaliana; NPQ; epigenetics; stress memory

Mesh:

Substances:

Year:  2018        PMID: 29707792     DOI: 10.1111/pce.13324

Source DB:  PubMed          Journal:  Plant Cell Environ        ISSN: 0140-7791            Impact factor:   7.228


  14 in total

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Authors:  Gaurav Agarwal; Himabindu Kudapa; Abirami Ramalingam; Divya Choudhary; Pallavi Sinha; Vanika Garg; Vikas K Singh; Gunvant B Patil; Manish K Pandey; Henry T Nguyen; Baozhu Guo; Ramanjulu Sunkar; Chad E Niederhuth; Rajeev K Varshney
Journal:  Funct Integr Genomics       Date:  2020-10-21       Impact factor: 3.410

2.  Unique and contrasting effects of light and temperature cues on plant transcriptional programs.

Authors:  Mai Jarad; Rea Antoniou-Kourounioti; Jo Hepworth; Julia I Qüesta
Journal:  Transcription       Date:  2020-10-04

3.  Stable unmethylated DNA demarcates expressed genes and their cis-regulatory space in plant genomes.

Authors:  Peter A Crisp; Alexandre P Marand; Jaclyn M Noshay; Peng Zhou; Zefu Lu; Robert J Schmitz; Nathan M Springer
Journal:  Proc Natl Acad Sci U S A       Date:  2020-09-02       Impact factor: 11.205

4.  Integrative analysis of chloroplast DNA methylation in a marine alga-Saccharina japonica.

Authors:  Linhong Teng; Wentao Han; Xiao Fan; Xiaowen Zhang; Dong Xu; Yitao Wang; Sadequr Rahman; Matteo Pellegrini; Thomas Mock; Naihao Ye
Journal:  Plant Mol Biol       Date:  2021-02-02       Impact factor: 4.076

Review 5.  Epigenome plasticity in plants.

Authors:  James P B Lloyd; Ryan Lister
Journal:  Nat Rev Genet       Date:  2021-09-15       Impact factor: 53.242

Review 6.  Epimutations Define a Fast-Ticking Molecular Clock in Plants.

Authors:  Nan Yao; Robert J Schmitz; Frank Johannes
Journal:  Trends Genet       Date:  2021-05-17       Impact factor: 11.821

7.  Excess Light Priming in Arabidopsis thaliana Genotypes with Altered DNA Methylomes.

Authors:  Diep R Ganguly; Bethany A B Stone; Andrew F Bowerman; Steven R Eichten; Barry J Pogson
Journal:  G3 (Bethesda)       Date:  2019-11-05       Impact factor: 3.154

8.  Genotype-Specific Modulatory Effects of Select Spectral Bandwidths on the Nutritive and Phytochemical Composition of Microgreens.

Authors:  Marios C Kyriacou; Christophe El-Nakhel; Antonio Pannico; Giulia Graziani; Georgios A Soteriou; Maria Giordano; Armando Zarrelli; Alberto Ritieni; Stefania De Pascale; Youssef Rouphael
Journal:  Front Plant Sci       Date:  2019-11-19       Impact factor: 5.753

9.  Segregation of an MSH1 RNAi transgene produces heritable non-genetic memory in association with methylome reprogramming.

Authors:  Xiaodong Yang; Robersy Sanchez; Hardik Kundariya; Tom Maher; Isaac Dopp; Rosemary Schwegel; Kamaldeep Virdi; Michael J Axtell; Sally A Mackenzie
Journal:  Nat Commun       Date:  2020-05-05       Impact factor: 14.919

10.  Chloroplast development and genomes uncoupled signaling are independent of the RNA-directed DNA methylation pathway.

Authors:  Liangsheng Wang; Dario Leister; Tatjana Kleine
Journal:  Sci Rep       Date:  2020-09-22       Impact factor: 4.379

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