Literature DB >> 29703961

Genetic variants in chemokine CC subfamily genes influence hepatitis C virus viral clearance.

Yinan Yao1, Ming Yue2, Feng Zang1, Mei Liu1, Haozhi Fan1, Lingyun Zhuo1, Jingjing Wu1, Xueshan Xia3, Yue Feng3, Peng Huang4,5, Rongbin Yu6,7.   

Abstract

Chemokine genes may influence both hepatitis C virus (HCV) spontaneous clearance in acute infection and treatment response in chronic infection. We conducted this study to evaluate whether the genetic variants in several CC family genes influence HCV spontaneous clearance and treatment response. The current research genotyped eight SNPs, including CCR1 rs3733096, rs13096371, CCR5 rs746492, rs1800874, CCL3 rs1130371, CCL5 rs3817656, CCL8 rs1133763, CCL14 rs854625, to explore their associations with HCV spontaneous clearance and response to treatment in two populations. We identified that the CCR1 rs3733096 (dominant model: adjusted OR = 2.29, 95% CI = 1.49-3.53, additive model: adjusted OR = 2.21, 95% CI = 1.50-3.25) and CCL5 rs3817656 (dominant model: OR = 1.37, 95% CI = 1.10-1.70, additive model: OR = 1.33, 95% CI = 1.12-1.58) were associated with HCV spontaneous clearance in Chinese Han population, while we found no association with treatment response. Moreover, the expression quantitative trait loci (eQTL) analysis showed that the risk alleles of rs3817656 were significantly associated with downregulated expression of CCL5 in whole blood (P < 0.001). The polymorphism of CCR1 rs3733096 and CCL5 rs3817656 are associated with spontaneous clearance of HCV in Chinese Han population.

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Year:  2018        PMID: 29703961     DOI: 10.1038/s10038-018-0452-9

Source DB:  PubMed          Journal:  J Hum Genet        ISSN: 1434-5161            Impact factor:   3.172


  36 in total

1.  Chemokine and chemokine receptor gene polymorphism in Tunisian hemodialysis patients with HCV infection.

Authors:  Leila Ksiaa Cheikh Rouhou; Yousr Lakhoua Gorgi; Hajer Aounallah Skhiri; Houda Aouadi; Salwa Jendoubi Ayed; Imen Sfar; Khaled Ayed; Taieb Ben Abdallah
Journal:  Arab J Nephrol Transplant       Date:  2011-09

2.  Hepatic ISG expression is associated with genetic variation in interleukin 28B and the outcome of IFN therapy for chronic hepatitis C.

Authors:  Masao Honda; Akito Sakai; Tatsuya Yamashita; Yasunari Nakamoto; Eishiro Mizukoshi; Yoshio Sakai; Taro Yamashita; Mikiko Nakamura; Takayoshi Shirasaki; Katsuhisa Horimoto; Yasuhito Tanaka; Katsushi Tokunaga; Masashi Mizokami; Shuichi Kaneko
Journal:  Gastroenterology       Date:  2010-04-29       Impact factor: 22.682

Review 3.  CCL5: a double-edged sword in host defense against the hepatitis C virus.

Authors:  Antonios Katsounas; Joerg F Schlaak; Richard A Lempicki
Journal:  Int Rev Immunol       Date:  2011 Oct-Dec       Impact factor: 5.311

4.  Expression and function of CXC and CC chemokines in human malignant liver tumors: a role for human monokine induced by gamma-interferon in lymphocyte recruitment to hepatocellular carcinoma.

Authors:  K F Yoong; S C Afford; R Jones; P Aujla; S Qin; K Price; S G Hubscher; D H Adams
Journal:  Hepatology       Date:  1999-07       Impact factor: 17.425

5.  Single nucleotide polymorphisms of CXCL9-11 chemokines are associated with liver fibrosis in HIV/HCV-coinfected patients.

Authors:  Daniel Pineda-Tenor; Juan Berenguer; Mónica García-Álvarez; María Guzmán-Fulgencio; Ana Carrero; Teresa Aldámiz-Echevarria; Francisco Tejerina; Cristina Diez; María A Jiménez-Sousa; Amanda Fernández-Rodríguez; María A Munoz-Fernandez; Salvador Resino
Journal:  J Acquir Immune Defic Syndr       Date:  2015-04-01       Impact factor: 3.731

Review 6.  Genomics and HCV infection: progression of fibrosis and treatment response.

Authors:  Emilie Estrabaud; Michel Vidaud; Patrick Marcellin; Tarik Asselah
Journal:  J Hepatol       Date:  2012-05-30       Impact factor: 25.083

7.  CCR5 gene polymorphism is a genetic risk factor for radiographic severity of rheumatoid arthritis.

Authors:  S W Han; K H Sa; S I Kim; S I Lee; Y W Park; S S Lee; W H Yoo; J S Soe; E J Nam; J Lee; J Y Park; Y M Kang
Journal:  Tissue Antigens       Date:  2012-08-24

8.  Genome-wide association study of spontaneous resolution of hepatitis C virus infection: data from multiple cohorts.

Authors:  Priya Duggal; Chloe L Thio; Genevieve L Wojcik; James J Goedert; Alessandra Mangia; Rachel Latanich; Arthur Y Kim; Georg M Lauer; Raymond T Chung; Marion G Peters; Gregory D Kirk; Shruti H Mehta; Andrea L Cox; Salim I Khakoo; Laurent Alric; Matthew E Cramp; Sharyne M Donfield; Brian R Edlin; Leslie H Tobler; Michael P Busch; Graeme Alexander; Hugo R Rosen; Xiaojiang Gao; Mohamed Abdel-Hamid; Richard Apps; Mary Carrington; David L Thomas
Journal:  Ann Intern Med       Date:  2013-02-19       Impact factor: 25.391

9.  Genetic variation in IL28B and spontaneous clearance of hepatitis C virus.

Authors:  David L Thomas; Chloe L Thio; Maureen P Martin; Ying Qi; Dongliang Ge; Colm O'Huigin; Judith Kidd; Kenneth Kidd; Salim I Khakoo; Graeme Alexander; James J Goedert; Gregory D Kirk; Sharyne M Donfield; Hugo R Rosen; Leslie H Tobler; Michael P Busch; John G McHutchison; David B Goldstein; Mary Carrington
Journal:  Nature       Date:  2009-10-08       Impact factor: 49.962

10.  Chemokine receptor expression identifies Pre-T helper (Th)1, Pre-Th2, and nonpolarized cells among human CD4+ central memory T cells.

Authors:  Laura Rivino; Mara Messi; David Jarrossay; Antonio Lanzavecchia; Federica Sallusto; Jens Geginat
Journal:  J Exp Med       Date:  2004-09-20       Impact factor: 14.307

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