Literature DB >> 29698658

A novel use of infra-red spectroscopy (NIRS and ATR-FTIR) coupled with variable selection algorithms for the identification of insect species (Diptera: Sarcophagidae) of medico-legal relevance.

Taciano M Barbosa1, Leomir A S de Lima2, Marfran C D Dos Santos3, Simão D Vasconcelos1, Renata A Gama4, Kássio M G Lima5.   

Abstract

Unequivocal identification of fly specimens is an essential requirement in forensic entomology. Herein, a simple, non-destructive and rapid method based on two vibrational spectroscopy techniques [Near-Infrared Spectroscopy (NIRS) and attenuated total reflection Fourier-transform infrared (ATR-FTIR) spectroscopy] coupled with variable selection techniques such as genetic algorithm-linear discriminant analysis (GA-LDA) and successive projection algorithm-linear discriminant analysis (SPA-LDA) were applied for identifying and discriminating six species of flesh flies (Diptera: Sarcophagidae) native to Neotropical regions. This novel approach is based on the unique spectral "fingerprints" of their biochemical composition. One hundred sixty (160) NIRS and FT-IR specimens (120 male, 40 female) were acquired; different pre-processing methods such as baseline correction, derivative and Savitzky-Golay smoothing were also performed. In addition, the multivariate classification accuracy results were tested based on sensitivity, specificity, positive (or precision) and negative predictive values, Youden index, positive and negative likelihood ratios. Principal components analysis (PCA) was employed for male vs. female category using NIRS, strongly showing the separation between the classes with only three principal components and 99% explained variance. Differentiation between the genera Oxysarcodexia, Peckia and Ravinia was efficiently confirmed by both techniques. In comparison with other biological methods, this approach represents an effective choice for fast and non-destructive identification in forensic entomology.
Copyright © 2018 Elsevier B.V. All rights reserved.

Keywords:  ATR-FTIR; Forensic entomology; GA-LDA; NIRS; PCA; SPA-LDA

Mesh:

Year:  2018        PMID: 29698658     DOI: 10.1016/j.actatropica.2018.04.025

Source DB:  PubMed          Journal:  Acta Trop        ISSN: 0001-706X            Impact factor:   3.112


  2 in total

1.  Highly Efficient Use of Infrared Spectroscopy (ATR-FTIR) to Identify Aphid Species.

Authors:  Roma Durak; Beata Ciak; Tomasz Durak
Journal:  Biology (Basel)       Date:  2022-08-18

2.  Prediction of mosquito species and population age structure using mid-infrared spectroscopy and supervised machine learning.

Authors:  Mario González Jiménez; Simon A Babayan; Pegah Khazaeli; Margaret Doyle; Finlay Walton; Elliott Reedy; Thomas Glew; Mafalda Viana; Lisa Ranford-Cartwright; Abdoulaye Niang; Doreen J Siria; Fredros O Okumu; Abdoulaye Diabaté; Heather M Ferguson; Francesco Baldini; Klaas Wynne
Journal:  Wellcome Open Res       Date:  2019-09-16
  2 in total

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