Literature DB >> 29692303

Bunyavirus Taxonomy: Limitations and Misconceptions Associated with the Current ICTV Criteria Used for Species Demarcation.

Bradley J Blitvich1, Barry J Beaty2, Carol D Blair2, Aaron C Brault3, Gerhard Dobler4, Michael A Drebot5, Andrew D Haddow6, Laura D Kramer7, Angelle Desiree LaBeaud8, Thomas P Monath9, Eric C Mossel3, Kenneth Plante10,11, Ann M Powers3, Robert B Tesh12,13,11, Michael J Turell14, Nikos Vasilakis11,13,15,12, Scott C Weaver15,11,10,12.   

Abstract

The International Committee on Taxonomy of Viruses (ICTV) has implemented numerous changes to the taxonomic classification of bunyaviruses over the years. Whereas most changes have been justified and necessary because of the need to accommodate newly discovered and unclassified viruses, other changes are a cause of concern, especially the decision to demote scores of formerly recognized species to essentially strains of newly designated species. This practice was first described in the seventh taxonomy report of the ICTV and has continued in all subsequent reports. In some instances, viruses that share less than 75% nucleotide sequence identity across their genomes, produce vastly different clinical presentations, possess distinct vector and host associations, have different biosafety recommendations, and occur in nonoverlapping geographic regions are classified as strains of the same species. Complicating the matter is the fact that virus strains have been completely eliminated from ICTV reports; thus, critically important information on virus identities and their associated biological and epidemiological features cannot be readily related to the ICTV classification. Here, we summarize the current status of bunyavirus taxonomy and discuss the adverse consequences associated with the reclassification and resulting omission of numerous viruses of public health importance from ICTV reports. As members of the American Committee on Arthropod-borne Viruses, we encourage the ICTV Bunyavirus Study Group to reconsider their stance on bunyavirus taxonomy, to revise the criteria currently used for species demarcation, and to list additional strains of public and veterinary importance.

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Year:  2018        PMID: 29692303      PMCID: PMC6085805          DOI: 10.4269/ajtmh.18-0038

Source DB:  PubMed          Journal:  Am J Trop Med Hyg        ISSN: 0002-9637            Impact factor:   2.345


  26 in total

1.  Changes to taxonomy and the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2017).

Authors:  Michael J Adams; Elliot J Lefkowitz; Andrew M Q King; Balázs Harrach; Robert L Harrison; Nick J Knowles; Andrew M Kropinski; Mart Krupovic; Jens H Kuhn; Arcady R Mushegian; Max Nibert; Sead Sabanadzovic; Hélène Sanfaçon; Stuart G Siddell; Peter Simmonds; Arvind Varsani; Francisco Murilo Zerbini; Alexander E Gorbalenya; Andrew J Davison
Journal:  Arch Virol       Date:  2017-04-22       Impact factor: 2.574

2.  [Complete genome analysis of the Batai virus (BATV) and the new Anadyr virus (ANADV) of the Bunyamwera group (Bunyaviridae, Orthobunyavirus) isolated in Russia].

Authors:  A M Shchetinin; D K Lvov; S V Alkhovsky; M Yu Shchelkanov; V A Aristova; T N Morozova; A K Gitelman; P G Deryabin; A G Botikov
Journal:  Vopr Virusol       Date:  2014

3.  Classification and nomenclature of viruses. Second report of the International Committee on Taxonomy of Viruses.

Authors:  F Fenner
Journal:  Intervirology       Date:  1976       Impact factor: 1.763

4.  Evidence from recombinant bunyavirus studies that the M RNA gene products elicit neutralizing antibodies.

Authors:  J R Gentsch; E J Rozhon; R A Klimas; L H El Said; R E Shope; D H Bishop
Journal:  Virology       Date:  1980-04-15       Impact factor: 3.616

5.  A new arbovirus from Aedes albopictus, an Asian mosquito established in the United States.

Authors:  D B Francy; N Karabatsos; D M Wesson; C G Moore; J S Lazuick; M L Niebylski; T F Tsai; G B Craig
Journal:  Science       Date:  1990-12-21       Impact factor: 47.728

6.  Distribution of Bunyamwera serogroup viruses in North America, 1956-1984.

Authors:  C H Calisher; D B Francy; G C Smith; D J Muth; J S Lazuick; N Karabatsos; W L Jakob; R G McLean
Journal:  Am J Trop Med Hyg       Date:  1986-03       Impact factor: 2.345

7.  Cache Valley and Potosi viruses (Bunyaviridae) in white-tailed deer (Odocoileus virginianus): experimental infections and antibody prevalence in natural populations.

Authors:  C G Blackmore; P R Grimstad
Journal:  Am J Trop Med Hyg       Date:  1998-11       Impact factor: 2.345

Review 8.  Mosquito-borne viruses in Europe.

Authors:  Zdenek Hubálek
Journal:  Parasitol Res       Date:  2008-11-23       Impact factor: 2.289

9.  Maguari Virus Associated with Human Disease.

Authors:  Allison Groseth; Veronica Vine; Carla Weisend; Carolina Guevara; Douglas Watts; Brandy Russell; Robert B Tesh; Hideki Ebihara
Journal:  Emerg Infect Dis       Date:  2017-08       Impact factor: 6.883

Review 10.  Predicting virus emergence amid evolutionary noise.

Authors:  Jemma L Geoghegan; Edward C Holmes
Journal:  Open Biol       Date:  2017-10       Impact factor: 6.411

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  10 in total

1.  Evaluation of an Indirect Enzyme-Linked Immunosorbent Assay Based on Recombinant Baculovirus-Expressed Rift Valley Fever Virus Nucleoprotein as the Diagnostic Antigen.

Authors:  Bonto Faburay; William C Wilson; Arss Secka; Barbara Drolet; D Scott McVey; Juergen A Richt
Journal:  J Clin Microbiol       Date:  2019-09-24       Impact factor: 5.948

2.  Strengthening the Interaction of the Virology Community with the International Committee on Taxonomy of Viruses (ICTV) by Linking Virus Names and Their Abbreviations to Virus Species.

Authors:  Charles H Calisher; Thomas Briese; J Rodney Brister; Rémi N Charrel; Ralf Dürrwald; Hideki Ebihara; Charles F Fulhorst; George Fú Gāo; Martin H Groschup; Andrew D Haddow; Timothy H Hyndman; Sandra Junglen; Boris Klempa; Jonas Klingström; Andrew M Kropinski; Mart Krupovic; A Desiree LaBeaud; Piet Maes; Norbert Nowotny; Márcio Roberto Teixeira Nunes; Susan L Payne; Sheli R Radoshitzky; Dennis Rubbenstroth; Sead Sabanadzovic; Takahide Sasaya; Mark D Stenglein; Arvind Varsani; Victoria Wahl; Scott C Weaver; Francisco Murilo Zerbini; Nikos Vasilakis; Jens H Kuhn
Journal:  Syst Biol       Date:  2019-09-01       Impact factor: 15.683

3.  Identification of Bunyamwera and Possible Other Orthobunyavirus Infections and Disease in Cattle during a Rift Valley Fever Outbreak in Rwanda in 2018.

Authors:  Marie Fausta Dutuze; Angelique Ingabire; Isidore Gafarasi; Solange Uwituze; Manassé Nzayirambaho; Rebecca C Christofferson
Journal:  Am J Trop Med Hyg       Date:  2020-04-16       Impact factor: 2.345

4.  Phylogenetic Analysis of Lednice Orthobunyavirus.

Authors:  Rebeka Lucijana Berčič; Krisztián Bányai; Daniel Růžek; Enikő Fehér; Marianna Domán; Vlasta Danielová; Tamás Bakonyi; Norbert Nowotny
Journal:  Microorganisms       Date:  2019-10-13

5.  First detection of bat-borne Issyk-Kul virus in Europe.

Authors:  Annika Brinkmann; Claudia Kohl; Aleksandar Radonić; Piotr Wojtek Dabrowski; Kristin Mühldorfer; Andreas Nitsche; Gudrun Wibbelt; Andreas Kurth
Journal:  Sci Rep       Date:  2020-12-24       Impact factor: 4.379

6.  Genomic characterization of 99 viruses from the bunyavirus families Nairoviridae, Peribunyaviridae, and Phenuiviridae, including 35 previously unsequenced viruses.

Authors:  Marylee L Kapuscinski; Nicholas A Bergren; Brandy J Russell; Justin S Lee; Erin M Borland; Daniel A Hartman; David C King; Holly R Hughes; Kristen L Burkhalter; Rebekah C Kading; Mark D Stenglein
Journal:  PLoS Pathog       Date:  2021-03-01       Impact factor: 6.823

7.  The virome of German bats: comparing virus discovery approaches.

Authors:  Claudia Kohl; Annika Brinkmann; Aleksandar Radonić; Piotr Wojtek Dabrowski; Kristin Mühldorfer; Andreas Nitsche; Gudrun Wibbelt; Andreas Kurth
Journal:  Sci Rep       Date:  2021-04-01       Impact factor: 4.379

8.  Evidence of circulation of Orthobunyaviruses in diverse mosquito species in Kwale County, Kenya.

Authors:  Hellen Koka; Joel Lutomiah; Solomon Langat; Edith Koskei; Albert Nyunja; James Mutisya; Francis Mulwa; Samuel Owaka; Victor Ofula; Samson Konongoi; Fredrick Eyase; Rosemary Sang
Journal:  Virol J       Date:  2021-10-12       Impact factor: 4.099

9.  Evidence that Lokern virus (family Peribunyaviridae) is a reassortant that acquired its small and large genome segments from Main Drain virus and its medium genome segment from an undiscovered virus.

Authors:  Chandra S Tangudu; Jermilia Charles; Bradley J Blitvich
Journal:  Virol J       Date:  2018-08-06       Impact factor: 4.099

Review 10.  Virus classification - where do you draw the line?

Authors:  Peter Simmonds; Pakorn Aiewsakun
Journal:  Arch Virol       Date:  2018-07-24       Impact factor: 2.574

  10 in total

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