Literature DB >> 29683665

Convergence of Artificial Protein Polymers and Intrinsically Disordered Proteins.

Michael Dzuricky1, Stefan Roberts1, Ashutosh Chilkoti1.   

Abstract

A flurry of research in recent years has revealed the molecular origins of many membraneless organelles to be the liquid phase separation of intrinsically disordered proteins (IDPs). Consequently, protein disorder has emerged as an important driver of intracellular compartmentalization by providing specialized microenvironments chemically distinct from the surrounding medium. Though the importance of protein disorder and its relationship to intracellular phase behavior are clear, a detailed understanding of how such phase behavior can be predicted and controlled remains elusive. While research in IDPs has largely focused on the implications of structural disorder on cellular function and disease, another field, that of artificial protein polymers, has focused on the de novo design of protein polymers with controllable material properties. A subset of these polymers, specifically those derived from structural proteins such as elastin and resilin, are also disordered sequences that undergo liquid-liquid phase separation. This phase separation has been used in a variety of biomedical applications, and researchers studying these polymers have developed methods to precisely characterize and tune their phase behavior. Despite their disparate origins, both fields are complementary as they study the phase behavior of intrinsically disordered polypeptides. This Perspective hopes to stimulate collaborative efforts by highlighting the similarities between these two fields and by providing examples of how such collaboration could be mutually beneficial.

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Year:  2018        PMID: 29683665      PMCID: PMC6311704          DOI: 10.1021/acs.biochem.8b00056

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  21 in total

Review 1.  Methods for producing microstructured hydrogels for targeted applications in biology.

Authors:  Cristobal Garcia Garcia; Kristi L Kiick
Journal:  Acta Biomater       Date:  2018-11-20       Impact factor: 8.947

Review 2.  Intrinsically disordered proteins in crowded milieu: when chaos prevails within the cellular gumbo.

Authors:  Alexander V Fonin; April L Darling; Irina M Kuznetsova; Konstantin K Turoverov; Vladimir N Uversky
Journal:  Cell Mol Life Sci       Date:  2018-07-31       Impact factor: 9.261

3.  Liquid-liquid phase separation drives skin barrier formation.

Authors:  Felipe Garcia Quiroz; Vincent F Fiore; John Levorse; Lisa Polak; Ellen Wong; H Amalia Pasolli; Elaine Fuchs
Journal:  Science       Date:  2020-03-13       Impact factor: 47.728

4.  Calibration between trigger and color: Neutralization of a genetically encoded coulombic switch and dynamic arrest precisely tune reflectin assembly.

Authors:  Robert Levenson; Colton Bracken; Cristian Sharma; Jerome Santos; Claire Arata; Brandon Malady; Daniel E Morse
Journal:  J Biol Chem       Date:  2019-09-26       Impact factor: 5.157

5.  An analytical theory to describe sequence-specific inter-residue distance profiles for polyampholytes and intrinsically disordered proteins.

Authors:  Jonathan Huihui; Kingshuk Ghosh
Journal:  J Chem Phys       Date:  2020-04-30       Impact factor: 3.488

6.  A unified analytical theory of heteropolymers for sequence-specific phase behaviors of polyelectrolytes and polyampholytes.

Authors:  Yi-Hsuan Lin; Jacob P Brady; Hue Sun Chan; Kingshuk Ghosh
Journal:  J Chem Phys       Date:  2020-01-31       Impact factor: 3.488

7.  Identifying sequence perturbations to an intrinsically disordered protein that determine its phase-separation behavior.

Authors:  Benjamin S Schuster; Gregory L Dignon; Wai Shing Tang; Fleurie M Kelley; Aishwarya Kanchi Ranganath; Craig N Jahnke; Alison G Simpkins; Roshan Mammen Regy; Daniel A Hammer; Matthew C Good; Jeetain Mittal
Journal:  Proc Natl Acad Sci U S A       Date:  2020-05-11       Impact factor: 11.205

8.  Dual Self-Assembled Nanostructures from Intrinsically Disordered Protein Polymers with LCST Behavior and Antimicrobial Peptides.

Authors:  Sergio Acosta; Zhou Ye; Conrado Aparicio; Matilde Alonso; José Carlos Rodríguez-Cabello
Journal:  Biomacromolecules       Date:  2020-08-12       Impact factor: 6.988

9.  Refining the Design of Diblock Elastin-Like Polypeptides for Self-Assembly into Nanoparticles.

Authors:  Michèle Dai; Evangelos Georgilis; Guillaume Goudounet; Bertrand Garbay; Jan Pille; Jan C M van Hest; Xavier Schultze; Elisabeth Garanger; Sébastien Lecommandoux
Journal:  Polymers (Basel)       Date:  2021-05-01       Impact factor: 4.329

10.  De novo engineering of intracellular condensates using artificial disordered proteins.

Authors:  Michael Dzuricky; Bradley A Rogers; Abdulla Shahid; Paul S Cremer; Ashutosh Chilkoti
Journal:  Nat Chem       Date:  2020-08-03       Impact factor: 24.427

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