OBJECTIVE: In this paper, we propose a robust, efficient, and automatic reconnection algorithm for bridging interrupted curvilinear skeletons in ophthalmologic images. METHODS: This method employs the contour completion process, i.e., mathematical modeling of the direction process in the roto-translation group to achieve line propagation/completion. The completion process can be used to reconstruct interrupted curves by considering their local consistency. An explicit scheme with finite-difference approximation is used to construct the three-dimensional (3-D) completion kernel, where we choose the Gamma distribution for time integration. To process structures in , the orientation score framework is exploited to lift the 2-D curvilinear segments into the 3-D space. The propagation and reconnection of interrupted segments are achieved by convolving the completion kernel with orientation scores via iterative group convolutions. To overcome the problem of incorrect skeletonization of 2-D structures at junctions, a 3-D segment-wise thinning technique is proposed to process each segment separately in orientation scores. RESULTS: Validations on 4 datasets with different image modalities show that our method achieves an average success rate of in reconnecting gaps of sizes from to , including challenging junction structures. CONCLUSION: The reconnection approach can be a useful and reliable technique for bridging complex curvilinear interruptions. SIGNIFICANCE: The presented method is a critical work to obtain more complete curvilinear structures in ophthalmologic images. It provides better topological and geometric connectivities for further analysis.
OBJECTIVE: In this paper, we propose a robust, efficient, and automatic reconnection algorithm for bridging interrupted curvilinear skeletons in ophthalmologic images. METHODS: This method employs the contour completion process, i.e., mathematical modeling of the direction process in the roto-translation group to achieve line propagation/completion. The completion process can be used to reconstruct interrupted curves by considering their local consistency. An explicit scheme with finite-difference approximation is used to construct the three-dimensional (3-D) completion kernel, where we choose the Gamma distribution for time integration. To process structures in , the orientation score framework is exploited to lift the 2-D curvilinear segments into the 3-D space. The propagation and reconnection of interrupted segments are achieved by convolving the completion kernel with orientation scores via iterative group convolutions. To overcome the problem of incorrect skeletonization of 2-D structures at junctions, a 3-D segment-wise thinning technique is proposed to process each segment separately in orientation scores. RESULTS: Validations on 4 datasets with different image modalities show that our method achieves an average success rate of in reconnecting gaps of sizes from to , including challenging junction structures. CONCLUSION: The reconnection approach can be a useful and reliable technique for bridging complex curvilinear interruptions. SIGNIFICANCE: The presented method is a critical work to obtain more complete curvilinear structures in ophthalmologic images. It provides better topological and geometric connectivities for further analysis.
Authors: Joes Staal; Michael D Abràmoff; Meindert Niemeijer; Max A Viergever; Bram van Ginneken Journal: IEEE Trans Med Imaging Date: 2004-04 Impact factor: 10.048
Authors: N D Forkert; A Schmidt-Richberg; J Fiehler; T Illies; D Möller; H Handels; D Säring Journal: Methods Inf Med Date: 2012-08-31 Impact factor: 2.176
Authors: Dan Ziegler; Nikolaos Papanas; Andrey Zhivov; Stephan Allgeier; Karsten Winter; Iris Ziegler; Jutta Brüggemann; Alexander Strom; Sabine Peschel; Bernd Köhler; Oliver Stachs; Rudolf F Guthoff; Michael Roden Journal: Diabetes Date: 2014-02-26 Impact factor: 9.461