Literature DB >> 29681510

Germline Genetic IKZF1 Variation and Predisposition to Childhood Acute Lymphoblastic Leukemia.

Michelle L Churchman1, Maoxiang Qian2, Geertruy Te Kronnie3, Ranran Zhang4, Wenjian Yang2, Hui Zhang5, Tobia Lana3, Paige Tedrick6, Rebekah Baskin6, Katherine Verbist6, Jennifer L Peters7, Meenakshi Devidas8, Eric Larsen9, Ian M Moore1, Zhaohui Gu1, Chunxu Qu1, Hiroki Yoshihara1, Shaina N Porter10, Shondra M Pruett-Miller10, Gang Wu11, Elizabeth Raetz12, Paul L Martin13, W Paul Bowman14, Naomi Winick15, Elaine Mardis16, Robert Fulton17, Martin Stanulla18, William E Evans19, Mary V Relling19, Ching-Hon Pui20, Stephen P Hunger21, Mignon L Loh22, Rupert Handgretinger23, Kim E Nichols20, Jun J Yang24, Charles G Mullighan25.   

Abstract

Somatic genetic alterations of IKZF1, which encodes the lymphoid transcription factor IKAROS, are common in high-risk B-progenitor acute lymphoblastic leukemia (ALL) and are associated with poor prognosis. Such alterations result in the acquisition of stem cell-like features, overexpression of adhesion molecules causing aberrant cell-cell and cell-stroma interaction, and decreased sensitivity to tyrosine kinase inhibitors. Here we report coding germline IKZF1 variation in familial childhood ALL and 0.9% of presumed sporadic B-ALL, identifying 28 unique variants in 45 children. The majority of variants adversely affected IKZF1 function and drug responsiveness of leukemic cells. These results identify IKZF1 as a leukemia predisposition gene, and emphasize the importance of germline genetic variation in the development of both familial and sporadic ALL.
Copyright © 2018 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  ALL; IKAROS; IKZF1; acute lymphoblastic leukemia; drug response; familial leukemia; germline genetic variation; immunodeficiency; predisposition

Mesh:

Substances:

Year:  2018        PMID: 29681510      PMCID: PMC5953820          DOI: 10.1016/j.ccell.2018.03.021

Source DB:  PubMed          Journal:  Cancer Cell        ISSN: 1535-6108            Impact factor:   31.743


  62 in total

1.  A molecular dissection of the repression circuitry of Ikaros.

Authors:  Joseph Koipally; Katia Georgopoulos
Journal:  J Biol Chem       Date:  2002-05-15       Impact factor: 5.157

2.  Augmented therapy improves outcome for pediatric high risk acute lymphocytic leukemia: results of Children's Oncology Group trial P9906.

Authors:  W Paul Bowman; Eric L Larsen; Meenakshi Devidas; Stephen B Linda; Laurie Blach; Andrew J Carroll; William L Carroll; D Jeanette Pullen; Jonathan Shuster; Cheryl L Willman; Naomi Winick; Bruce M Camitta; Stephen P Hunger; Michael J Borowitz
Journal:  Pediatr Blood Cancer       Date:  2011-02-25       Impact factor: 3.167

3.  An ikaros-containing chromatin-remodeling complex in adult-type erythroid cells.

Authors:  D W O'Neill; S S Schoetz; R A Lopez; M Castle; L Rabinowitz; E Shor; D Krawchuk; M G Goll; M Renz; H P Seelig; S Han; R H Seong; S D Park; T Agalioti; N Munshi; D Thanos; H Erdjument-Bromage; P Tempst; A Bank
Journal:  Mol Cell Biol       Date:  2000-10       Impact factor: 4.272

4.  BCR-ABL1 lymphoblastic leukaemia is characterized by the deletion of Ikaros.

Authors:  Charles G Mullighan; Christopher B Miller; Ina Radtke; Letha A Phillips; James Dalton; Jing Ma; Deborah White; Timothy P Hughes; Michelle M Le Beau; Ching-Hon Pui; Mary V Relling; Sheila A Shurtleff; James R Downing
Journal:  Nature       Date:  2008-04-13       Impact factor: 49.962

5.  Germline genomic variants associated with childhood acute lymphoblastic leukemia.

Authors:  Lisa R Treviño; Wenjian Yang; Deborah French; Stephen P Hunger; William L Carroll; Meenakshi Devidas; Cheryl Willman; Geoffrey Neale; James Downing; Susana C Raimondi; Ching-Hon Pui; William E Evans; Mary V Relling
Journal:  Nat Genet       Date:  2009-08-16       Impact factor: 38.330

6.  Inherited GATA3 variants are associated with Ph-like childhood acute lymphoblastic leukemia and risk of relapse.

Authors:  Virginia Perez-Andreu; Kathryn G Roberts; Richard C Harvey; Wenjian Yang; Cheng Cheng; Deqing Pei; Heng Xu; Julie Gastier-Foster; Shuyu E; Joshua Yew-Suang Lim; I-Ming Chen; Yiping Fan; Meenakshi Devidas; Michael J Borowitz; Colton Smith; Geoffrey Neale; Esteban G Burchard; Dara G Torgerson; Federico Antillon Klussmann; Cesar Rolando Najera Villagran; Naomi J Winick; Bruce M Camitta; Elizabeth Raetz; Brent Wood; Feng Yue; William L Carroll; Eric Larsen; W Paul Bowman; Mignon L Loh; Michael Dean; Deepa Bhojwani; Ching-Hon Pui; William E Evans; Mary V Relling; Stephen P Hunger; Cheryl L Willman; Charles G Mullighan; Jun J Yang
Journal:  Nat Genet       Date:  2013-10-20       Impact factor: 38.330

7.  A general framework for estimating the relative pathogenicity of human genetic variants.

Authors:  Martin Kircher; Daniela M Witten; Preti Jain; Brian J O'Roak; Gregory M Cooper; Jay Shendure
Journal:  Nat Genet       Date:  2014-02-02       Impact factor: 38.330

8.  Genetics of ancestry-specific risk for relapse in acute lymphoblastic leukemia.

Authors:  S E Karol; E Larsen; C Cheng; X Cao; W Yang; L B Ramsey; C A Fernandez; J R McCorkle; S W Paugh; R J Autry; E Lopez-Lopez; B Diouf; S Jeha; C-H Pui; E A Raetz; N J Winick; W L Carroll; S P Hunger; M L Loh; M Devidas; W E Evans; J J Yang; M V Relling
Journal:  Leukemia       Date:  2017-01-18       Impact factor: 11.528

9.  Analysis of protein-coding genetic variation in 60,706 humans.

Authors:  Monkol Lek; Konrad J Karczewski; Eric V Minikel; Kaitlin E Samocha; Eric Banks; Timothy Fennell; Anne H O'Donnell-Luria; James S Ware; Andrew J Hill; Beryl B Cummings; Taru Tukiainen; Daniel P Birnbaum; Jack A Kosmicki; Laramie E Duncan; Karol Estrada; Fengmei Zhao; James Zou; Emma Pierce-Hoffman; Joanne Berghout; David N Cooper; Nicole Deflaux; Mark DePristo; Ron Do; Jason Flannick; Menachem Fromer; Laura Gauthier; Jackie Goldstein; Namrata Gupta; Daniel Howrigan; Adam Kiezun; Mitja I Kurki; Ami Levy Moonshine; Pradeep Natarajan; Lorena Orozco; Gina M Peloso; Ryan Poplin; Manuel A Rivas; Valentin Ruano-Rubio; Samuel A Rose; Douglas M Ruderfer; Khalid Shakir; Peter D Stenson; Christine Stevens; Brett P Thomas; Grace Tiao; Maria T Tusie-Luna; Ben Weisburd; Hong-Hee Won; Dongmei Yu; David M Altshuler; Diego Ardissino; Michael Boehnke; John Danesh; Stacey Donnelly; Roberto Elosua; Jose C Florez; Stacey B Gabriel; Gad Getz; Stephen J Glatt; Christina M Hultman; Sekar Kathiresan; Markku Laakso; Steven McCarroll; Mark I McCarthy; Dermot McGovern; Ruth McPherson; Benjamin M Neale; Aarno Palotie; Shaun M Purcell; Danish Saleheen; Jeremiah M Scharf; Pamela Sklar; Patrick F Sullivan; Jaakko Tuomilehto; Ming T Tsuang; Hugh C Watkins; James G Wilson; Mark J Daly; Daniel G MacArthur
Journal:  Nature       Date:  2016-08-18       Impact factor: 49.962

10.  IKAROS deletions dictate a unique gene expression signature in patients with adult B-cell acute lymphoblastic leukemia.

Authors:  Ilaria Iacobucci; Nunzio Iraci; Monica Messina; Annalisa Lonetti; Sabina Chiaretti; Emanuele Valli; Anna Ferrari; Cristina Papayannidis; Francesca Paoloni; Antonella Vitale; Clelia Tiziana Storlazzi; Emanuela Ottaviani; Viviana Guadagnuolo; Sandra Durante; Marco Vignetti; Simona Soverini; Fabrizio Pane; Robin Foà; Michele Baccarani; Markus Müschen; Giovanni Perini; Giovanni Martinelli
Journal:  PLoS One       Date:  2012-07-25       Impact factor: 3.240

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  59 in total

Review 1.  Ethical conundrums in pediatric genomics.

Authors:  Seth J Rotz; Eric Kodish
Journal:  Hematology Am Soc Hematol Educ Program       Date:  2018-11-30

Review 2.  Using genomics to define pediatric blood cancers and inform practice.

Authors:  Rachel E Rau; Mignon L Loh
Journal:  Hematology Am Soc Hematol Educ Program       Date:  2018-11-30

3.  Genome-Wide Association Study of Susceptibility Loci for T-Cell Acute Lymphoblastic Leukemia in Children.

Authors:  Maoxiang Qian; Xujie Zhao; Meenakshi Devidas; Wenjian Yang; Yoshihiro Gocho; Colton Smith; Julie M Gastier-Foster; Yizhen Li; Heng Xu; Shouyue Zhang; Sima Jeha; Xiaowen Zhai; Takaomi Sanda; Stuart S Winter; Kimberly P Dunsmore; Elizabeth A Raetz; William L Carroll; Naomi J Winick; Karen R Rabin; Patrick A Zweidler-Mckay; Brent Wood; Ching-Hon Pui; William E Evans; Stephen P Hunger; Charles G Mullighan; Mary V Relling; Mignon L Loh; Jun J Yang
Journal:  J Natl Cancer Inst       Date:  2019-12-01       Impact factor: 13.506

Review 4.  Next-Generation Evaluation and Treatment of Pediatric Acute Lymphoblastic Leukemia.

Authors:  Emily B Heikamp; Ching-Hon Pui
Journal:  J Pediatr       Date:  2018-09-10       Impact factor: 4.406

Review 5.  Genetic defects in hematopoietic transcription factors and predisposition to acute lymphoblastic leukemia.

Authors:  Yoshihiro Gocho; Jun J Yang
Journal:  Blood       Date:  2019-07-16       Impact factor: 22.113

Review 6.  Genetics and prognosis of ALL in children vs adults.

Authors:  Kathryn G Roberts
Journal:  Hematology Am Soc Hematol Educ Program       Date:  2018-11-30

7.  Transcriptional landscape of B cell precursor acute lymphoblastic leukemia based on an international study of 1,223 cases.

Authors:  Jian-Feng Li; Yu-Ting Dai; Henrik Lilljebjörn; Shu-Hong Shen; Bo-Wen Cui; Ling Bai; Yuan-Fang Liu; Mao-Xiang Qian; Yasuo Kubota; Hitoshi Kiyoi; Itaru Matsumura; Yasushi Miyazaki; Linda Olsson; Ah Moy Tan; Hany Ariffin; Jing Chen; Junko Takita; Takahiko Yasuda; Hiroyuki Mano; Bertil Johansson; Jun J Yang; Allen Eng-Juh Yeoh; Fumihiko Hayakawa; Zhu Chen; Ching-Hon Pui; Thoas Fioretos; Sai-Juan Chen; Jin-Yan Huang
Journal:  Proc Natl Acad Sci U S A       Date:  2018-11-28       Impact factor: 11.205

Review 8.  Emerging molecular subtypes and therapeutic targets in B-cell precursor acute lymphoblastic leukemia.

Authors:  Jianfeng Li; Yuting Dai; Liang Wu; Ming Zhang; Wen Ouyang; Jinyan Huang; Saijuan Chen
Journal:  Front Med       Date:  2021-01-05       Impact factor: 4.592

9.  Janus Kinase Mutations in Mice Lacking PU.1 and Spi-B Drive B Cell Leukemia through Reactive Oxygen Species-Induced DNA Damage.

Authors:  Michelle Lim; Carolina R Batista; Bruno R de Oliveira; Rachel Creighton; Jacob Ferguson; Kurt Clemmer; Devon Knight; James Iansavitchous; Danish Mahmood; Mariano Avino; Rodney P DeKoter
Journal:  Mol Cell Biol       Date:  2020-08-28       Impact factor: 4.272

Review 10.  Transcription factor mutations as a cause of familial myeloid neoplasms.

Authors:  Jane E Churpek; Emery H Bresnick
Journal:  J Clin Invest       Date:  2019-02-01       Impact factor: 14.808

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