Literature DB >> 29680925

Screening of some Croatian autochthonous grapevine varieties reveals a multitude of viruses, including novel ones.

Darko Vončina1, Rodrigo P P Almeida2.   

Abstract

Next-generation sequencing of total RNA samples from four Croatian autochthonous grapevine varieties revealed the presence of a novel virus in two grapevine accessions. The complete genome sequence of a novel virus, tentatively named "grapevine badnavirus 1" (GBV-1), was reconstructed from a de novo-assembled contig. GBV-1 has a genome of 7,145 nucleotides containing three ORFs with sequence similarity to other badnaviruses. In addition, several other viruses and viroids, including grapevine virus G, grapevine virus K/D, grapevine virus T, grapevine Roditis leaf discoloration-associated virus, grapevine yellow speckle viroids 1 and 2, and hop stunt viroid were detected and identified for the first time in Croatian grapevines in the course of this study.

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Year:  2018        PMID： 29680925     DOI： 10.1007/s00705-018-3850-6

Source DB:  PubMed          Journal:  Arch Virol        ISSN： 0304-8608            Impact factor:   2.574


  8 in total

1.  Virus and Virus-like Pathogens in the Grapevine Virus Collection of Croatian Autochthonous Grapevine Cultivars.

Authors:  Darko Vončina; Alfredo Diaz-Lara; Darko Preiner; Maher Al Rwahnih; Kristian Stevens; Snježana Jurić; Nenad Malenica; Silvio Šimon; Baozhong Meng; Edi Maletić; Hrvoje Fulgosi; Bogdan Cvjetković
Journal:  Plants (Basel)       Date:  2022-05-31

2.  Grapevine virus T is relatively widespread in Slovakia and Czech Republic and genetically diverse.

Authors:  Miroslav Glasa; Lukáš Predajňa; Nina Sihelská; Katarína Šoltys; Ana Belén Ruiz-García; Antonio Olmos; Thierry Wetzel; Sead Sabanadzovic
Journal:  Virus Genes       Date:  2018-07-11       Impact factor: 2.332

3.  Comparison of two different host plant genera responding to grapevine leafroll-associated virus 3 infection.

Authors:  Cecilia A Prator; Kar Mun Chooi; Dan Jones; Marcus W Davy; Robin M MacDiarmid; Rodrigo P P Almeida
Journal:  Sci Rep       Date:  2020-05-22       Impact factor: 4.379

4.  Prevalence of Virus Infections and GLRaV-3 Genetic Diversity in Selected Clones of Croatian Indigenous Grapevine Cultivar Plavac Mali.

Authors:  Mate Čarija; Tomislav Radić; Silvija Černi; Ana Mucalo; Goran Zdunić; Darko Vončina; Martin Jagunić; Katarina Hančević
Journal:  Pathogens       Date:  2022-01-27

5.  Grapevine Badnavirus 1: Detection, Genetic Diversity, and Distribution in Croatia.

Authors:  Martin Jagunić; Alfredo Diaz-Lara; Maher Al Rwahnih; Darko Preiner; Kristian Stevens; Goran Zdunić; Minsook Hwang; Darko Vončina
Journal:  Plants (Basel)       Date:  2022-08-16

6.  Characterization of Divergent Grapevine Badnavirus 1 Isolates Found on Different Fig Species (Ficus spp.).

Authors:  Sergei Chirkov; Anna Sheveleva; Svetlana Tsygankova; Fedor Sharko; Irina Mitrofanova
Journal:  Plants (Basel)       Date:  2022-09-27

7.  Grapevine virus T diversity as revealed by full-length genome sequences assembled from high-throughput sequence data.

Authors:  Shaheen Nourinejhad Zarghani; Jean Michel Hily; Miroslav Glasa; Armelle Marais; Thierry Wetzel; Chantal Faure; Emmanuelle Vigne; Amandine Velt; Olivier Lemaire; Jean Michel Boursiquot; Arnela Okic; Ana Belén Ruiz-Garcia; Antonio Olmos; Thierry Lacombe; Thierry Candresse
Journal:  PLoS One       Date:  2018-10-30       Impact factor: 3.240

8.  Detection, Transmission, and Characterization of Grapevine Virus H in Croatia.

Authors:  Martin Jagunić; Boris Lazarević; Kristina Nikolić; Domagoj Stupić; Darko Preiner; Darko Vončina
Journal:  Pathogens       Date:  2021-12-03
  8 in total

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