Literature DB >> 29675648

Multi-wavelength analytical ultracentrifugation of human serum albumin complexed with porphyrin.

Courtney N Johnson1, Gary E Gorbet1, Heidi Ramsower2, Julio Urquidi2, Lorenzo Brancaleon2, Borries Demeler3.   

Abstract

The new Beckman Coulter Optima AUC instrument, which features multi-wavelength detection that couples the hydrodynamic separation of colloidal mixtures to spectral deconvolution of interacting and non-interacting solutes present in a mixture, was used to analyze the composition of human serum albumin (HSA) bound to metallo-protoporphyrin. We present new methods implemented in UltraScan that permit Optima AUC-derived multi-wavelength data to be spectrally decomposed in the same fashion as has been made possible for the Cölfen detector earlier. We demonstrate this approach by spectrally separating sedimentation velocity experimental data from mixtures of apo-HSA and HSA complexed to different metallo-protoporphyrins. We further demonstrate how multi-wavelength AUC can accurately recover percentages of metallo-protoporphyrin-bound HSA and apo-HSA from mixtures and how multi-wavelength AUC permits the calculation of molar extinction coefficients for porphyrins bound to HSA. The presented method has broad applicability to other complex systems where mixtures of molecules with different spectral properties need to be characterized.

Entities:  

Keywords:  Human serum albumin; Multi-wavelength analytical ultracentrifugation; Porphyrin; Spectral analysis; UltraScan

Mesh:

Substances:

Year:  2018        PMID: 29675648      PMCID: PMC6158097          DOI: 10.1007/s00249-018-1301-7

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  21 in total

1.  Direct sedimentation analysis of interference optical data in analytical ultracentrifugation.

Authors:  P Schuck; B Demeler
Journal:  Biophys J       Date:  1999-04       Impact factor: 4.033

2.  Next-Generation AUC: Analysis of Multiwavelength Analytical Ultracentrifugation Data.

Authors:  Gary E Gorbet; Joseph Z Pearson; Aysha K Demeler; Helmut Cölfen; Borries Demeler
Journal:  Methods Enzymol       Date:  2015-08-21       Impact factor: 1.600

3.  Simultaneous analysis of hydrodynamic and optical properties using analytical ultracentrifugation equipped with multiwavelength detection.

Authors:  Johannes Walter; Peter J Sherwood; Wei Lin; Doris Segets; Walter F Stafford; Wolfgang Peukert
Journal:  Anal Chem       Date:  2015-03-03       Impact factor: 6.986

4.  A parametrically constrained optimization method for fitting sedimentation velocity experiments.

Authors:  Gary Gorbet; Taylor Devlin; Blanca I Hernandez Uribe; Aysha K Demeler; Zachary L Lindsey; Suma Ganji; Sabrah Breton; Laura Weise-Cross; Eileen M Lafer; Emre H Brookes; Borries Demeler
Journal:  Biophys J       Date:  2014-04-15       Impact factor: 4.033

5.  Advanced Multiwavelength Detection in Analytical Ultracentrifugation.

Authors:  Joseph Pearson; Johannes Walter; Wolfgang Peukert; Helmut Cölfen
Journal:  Anal Chem       Date:  2017-12-22       Impact factor: 6.986

6.  Photosensitized reduction of water to hydrogen using human serum albumin complexed with zinc-protoporphyrin IX.

Authors:  Teruyuki Komatsu; Rong-Min Wang; Patricia A Zunszain; Stephen Curry; Eishun Tsuchida
Journal:  J Am Chem Soc       Date:  2006-12-20       Impact factor: 15.419

Review 7.  Serum heme-albumin: an allosteric protein.

Authors:  Paolo Ascenzi; Mauro Fasano
Journal:  IUBMB Life       Date:  2009-12       Impact factor: 3.885

8.  A two-dimensional spectrum analysis for sedimentation velocity experiments of mixtures with heterogeneity in molecular weight and shape.

Authors:  Emre Brookes; Weiming Cao; Borries Demeler
Journal:  Eur Biophys J       Date:  2009-02-27       Impact factor: 1.733

9.  The Open AUC Project.

Authors:  Helmut Cölfen; Thomas M Laue; Wendel Wohlleben; Kristian Schilling; Engin Karabudak; Bradley W Langhorst; Emre Brookes; Bruce Dubbs; Dan Zollars; Mattia Rocco; Borries Demeler
Journal:  Eur Biophys J       Date:  2009-03-19       Impact factor: 1.733

10.  Characterization of size, anisotropy, and density heterogeneity of nanoparticles by sedimentation velocity.

Authors:  Borries Demeler; Tich-Lam Nguyen; Gary E Gorbet; Virgil Schirf; Emre H Brookes; Paul Mulvaney; Ala'a O El-Ballouli; Jun Pan; Osman M Bakr; Aysha K Demeler; Blanca I Hernandez Uribe; Nabraj Bhattarai; Robert L Whetten
Journal:  Anal Chem       Date:  2014-07-18       Impact factor: 6.986

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  6 in total

1.  Analytical ultracentrifugation (AUC): a seminal tool offering multiple solutions.

Authors:  Olwyn Byron; Ivo Nischang; Trushar R Patel
Journal:  Eur Biophys J       Date:  2018-10       Impact factor: 1.733

Review 2.  Analytical ultracentrifuge: an ideal tool for characterization of non-coding RNAs.

Authors:  Maulik D Badmalia; M Quadir Siddiqui; Tyler Mrozowich; Darren L Gemmill; Trushar R Patel
Journal:  Eur Biophys J       Date:  2020-10-16       Impact factor: 1.733

Review 3.  In Vitro Analytical Approaches to Study Plant Ligand-Receptor Interactions.

Authors:  Pedro Jimenez Sandoval; Julia Santiago
Journal:  Plant Physiol       Date:  2020-02-07       Impact factor: 8.340

4.  Novel combinations of experimental and computational analysis tested on the binding of metalloprotoporphyrins to albumin.

Authors:  Jie Hu; Eduardo Hernandez Soraiz; Courtney N Johnson; Borries Demeler; Lorenzo Brancaleon
Journal:  Int J Biol Macromol       Date:  2019-05-10       Impact factor: 6.953

5.  Measuring molecular interactions in solution using multi-wavelength analytical ultracentrifugation: combining spectral analysis with hydrodynamics.

Authors:  Borries Demeler
Journal:  Biochem (Lond)       Date:  2019-04-01

6.  Moving analytical ultracentrifugation software to a good manufacturing practices (GMP) environment.

Authors:  Alexey Savelyev; Gary E Gorbet; Amy Henrickson; Borries Demeler
Journal:  PLoS Comput Biol       Date:  2020-06-19       Impact factor: 4.779

  6 in total

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