| Literature DB >> 29674783 |
Shaoying Liu1, Wei Jin2, Yang Liu3, Robert W Murphy4, Bin Lv5, Haibang Hao1, Rui Liao1, Zhiyu Sun1, Mingkun Tang1, Weicai Chen1, Jianrong Fu1.
Abstract
China has 26 species in the tribe Arvicolini. The taxonomic status of these voles remains controversial despite much effort. Herein, we evaluate the taxonomic position of 22 species plus 2 unidentified taxa using mitochondrial DNA gene sequences (cytb + CO1). We also evaluate 18 species and 2 unidentified taxa using morphological data. Phylogenetic analyses of cytb resolve monophyly for the genera Alexandromys, Lasiopodomys, Microtus, Neodon, Proedromys, and Volemys with strong support. Stenocranius clusters with Chionomys but with very weak support. Analyses of concatenated cytb + CO1 resolve the same genera with strong support, but the topology of the tree differs from that of cytb in that Chionomys roots at the base of the tree independent of Stenocranius, which forms the sister-group of Lasiopodomys in a more terminal position. The matrilineal genealogy excludes the type species Arvicola amphibius from the rest of the Arvicolini. This species forms the sister-group of Ondatra with high support. Neodon includes N. irene, N. linzhiensis, N. fuscus, N. leucurus, N. sikimensis, Microtus clarkei, and 2 unidentified specimens. Alexandromys includes the former species Microtus oeconomus, M. kikuchii, M. limnophilus, M. fortis, and M. maximowiczii. Finally, Microtus has the subgenera Blanfordimys, Microtus, Mynomes, Pedomys, Pitymys, and Terricola, which includes the Chinese species M. agrestis, M. arvalis, and Blanfordimys juldaschi. General mixed Yule-coalescent species delimitation modeling demarcates 6 currently recognized species and 2 new species of Neodon. A principal component analysis of the morphological data among 7 matrilines shows that all variables have positive loadings of high magnitude on the 1st component. Canonical discriminant analysis for Neodon (including M. clarkei and 2 unidentified species) correctly classifies 93.0% of specimens. Overall, our analyses support the recognition of Alexandromys, Lasiopodomys, Microtus, Neodon, Proedromys, and Volemys as genera. Stenocranius includes Microtus gregalis, and the genealogical position of Stenocranius remains uncertain. The status of Arvicola requires further study. We assign M. clarkei to Neodon and describe 2 new species of Neodon.Entities:
Keywords: Arvicolini; China; Hengduan Mountains; Neodon; Proedromys; new species
Year: 2016 PMID: 29674783 PMCID: PMC5901085 DOI: 10.1093/jmammal/gyw170
Source DB: PubMed Journal: J Mammal ISSN: 0022-2372 Impact factor: 2.416
Fig. 1.Geographic distribution of Chinese samples of the species of Arvicolini used in this study.
Estimates of the mean distance (K2P) between clades in the genus of Neodon.
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| Unidentified taxon from Mêdog |
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| 0.108 | ||||||
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| 0.119 | 0.129 | |||||
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| 0.105 | 0.120 | 0.120 | ||||
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| 0.105 | 0.112 | 0.130 | 0.107 | |||
| Unidentified taxon from Mêdog | 0.109 | 0.116 | 0.130 | 0.120 | 0.101 | ||
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| 0.119 | 0.123 | 0.120 | 0.114 | 0.110 | 0.106 | |
| Unidentified taxon from Nyalam | 0.103 | 0.118 | 0.123 | 0.113 | 0.102 | 0.117 | 0.111 |
Fig. 2.Fifty percent majority rule consensus tree from Bayesian inference analysis of cytb sequences. Numbers are Bayesian posterior probabilities, which are shown for critical nodes only.
Fig. 3.Fifty percent majority rule consensus tree from Bayesian inference analysis of concatenated cytb and CO1. Numbers are Bayesian posterior probabilities, which are shown for critical nodes only.
Fig. 4.GMYC-based species delimitation based on cytb trees. Thick vertical lines denote designated species and genera. Dashed lines indicate the maximum-likelihood transition point where the branching rates switch from interspecific to intraspecific events, as estimated by the GMYC model. GMYC = general mixed Yule-coalescent.
Fig. 5.Principal component analysis (PCA) trivariate plots. A) PCA among 6 matrilines of Arvicolini; B) PCA among 8 aggregations of Neodon.
Comparison of molar morphology between 2 new species and 5 species of the same genus and Microtus clarkei, Volemys millicens.
| M1 | M1 | M2 | M3 | |
|---|---|---|---|---|
| Unidentified taxon from Mêdog | 4 closed triangles; 6 inner and 5 outer angles | 3 inner and 3 outer angles | 3 inner and 3 outer angles | 4 inner and 4 outer angles in 70% specimens; 4 inner and 3 outer angles in 30% specimens |
| Unidentified taxon from Nyalam | 3 closed triangles; 6 inner and 5 outer angles | 4 inner and 3 outer angles | 3 inner and 3 outer angles | 4 inner and 4 outer angles in 80% specimens; 4 inner and 3 outer angles in 20% specimens |
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| 3 closed triangles; 6 inner and 5 outer angles | 3 inner and 3 outer angles | 3 inner and 3 outer angles | 4 inner and 3 outer angles |
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| 3 closed triangles; 5 inner and 4 outer angels | 3 inner and 3 outer angles | 2 inner and 3 outer angles | 3 inner and 3 outer angles |
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| 5 closed triangles; 6 inner and 4 outer angles | 3 inner and 3 outer angles | 2 inner and 3 outer angles | 50% specimens have 4 inner and 3 outer angles; the rest have 3 inner and 3 outer angles |
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| 4 closed triangles; 5 inner and 4 outer angles | 3 inner and 3 outer angles | 2 inner and 3 outer angles | 3 inner and 3 outer angles |
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| 3 closed triangles; 5 inner and 3 outer angles | 3 inner and 3 outer angles | 2 inner and 3 outer angles | 3 inner and 3 outer angles |
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| 5 closed triangles; 6 inner and 4 outer angles | 3 inner and 3 outer angles | 3 inner and 3 outer angles | 4 inner and 3 outer angles |
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| 4 closed triangles; 5 inner and 4 outer angles | 3 inner and 3 outer angles | 3 inner and 3 outer angles | 4 inner and 3 outer angles |
Comparison of measurements (in mm) between 2 new species, Microtus clarkei, and Volemys millicens. Mean values (in mm) are followed by ranges in parenthesis (w: g).
| New species from Mêdog | New species from Nyalam |
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| Holotype | Other specimens | Holotype | Other specimens | |||
| W | 39.2 | 34.3 (26.3–41.4) | 36 | 31.7 (26–36) | 44.8 (30–52) | 21.3 (20–24) |
| HBL | 110 | 100.9 (89–110) | 106 | 105.5 (98–115) | 117.6 (103–130) | 92.2 (85–102) |
| TL | 44 | 48.0 (43–55) | 46 | 43.6 (38–50) | 66.3 (53–71) | 46.1 (42–49) |
| HFL | 20 | 19.6 (18–20) | 19 | 18.3 (17–20) | 21.3 (21–22) | 17.4 (16–18) |
| EL | 14 | 13.6 (12–15) | 13 | 12.2 (11–13) | 15.2 (15–16) | 12.4 (12–13) |
| TL/HBL | 40 | 47.6 (42.0–55.0) | 43.4 | 41.3 (37.0–44.0) | 56.4 (50.0–60.0) | 50.0 (45.2–52.9) |
| SGL | 26.81 | 26.65 (24.11–28.54) | 27.08 | 26.12 (25.25–27.19) | 29.50 (28.86–30.17) | 24.22 (23.14–25.10) |
| SBL | 25.39 | 25.11 (22.7–26.85) | 25.32 | 24.02 (22.67–25.60) | 27.77 (27.36–28.41) | 22.44 (21.45–23.39) |
| CBL | 26.79 | 26.49 (24.01–28.13) | 26.62 | 26.22 (24.09–27.05) | 28.68 (27.93–30.06) | 23.34 (22.33–24.19) |
| ZB | 15.87 | 15.45 (13.42–16.56) | 15.75 | 14.87 (13.98–15.72) | 16.51 (16.25–16.75) | 13.13 (12.28–13.65) |
| IOW | 3.75 | 4.01 (3.52–4.32) | 3.42 | 3.67 (3.56–4.06) | 4.13 (3.96–4.17) | 4.15 (3.93–4.37) |
| MB | 12.47 | 12.20 (11.37–12.61) | 11.9 | 11.78 (11.29–12.25) | 13.50 (12.5–13.75) | 11.66 (11.21–11.92) |
| SH | 10.46 | 9.97 (9.26–10.62) | 10.07 | 9.77 (9.24–10.53) | 10.43 (10.28–10.66) | 8.39 (7.88–8.80) |
| ABL | 6.8 | 6.72 (6.05–7.07) | 6.75 | 6.65 (6.42–6.95) | 8.17 (8.08–8.22) | 6.77 (6.46–7.24) |
| LMxT | 6.41 | 6.41 (5.95–7.07) | 6.42 | 6.34 (6.18–6.48) | 6.65 (6.50–6.70) | 5.41 (5.13–5.82) |
| LMbT | 6.24 | 6.32 (5.92–6.76) | 6.51 | 6.38 (6.17–6.61) | 6.65 (6.51–6.70) | 5.25 (5.04–5.54) |
| M-M | 5.58 | 5.56 (5.30–5.71) | 5.58 | 5.39 (5.01–5.61) | 5.47 (5.54–5.86) | 4.73 (4.55–5.00) |
| ML | 19.88 | 19.39 (17.45–21.11) | 19.48 | 18.71 (17.33–19.48) | 20.76 (19.76–21.40) | 16.97 (16.04–17.66) |
| LEPILM | 9.19 | 8.95 (7.31–9.75) | 8.89 | 8.19 (7.52–8.89) | 8.93 (8.27–9.48) | 7.14 (6.66–7.56) |
Fig. 6.Skulls of the new species Neodon medogensis and Neodon nyalamensis along with those of Microtus clarkei and Volemys millicens. A) N. medogensis; B) N. nyalamensis; C) M. clarkei; and D) V. millicens. 1: ventral view; 2: dorsal view; 3: lateral view; 4: lower jaw (ventral); 5: lower jaws (lateral); 6: upper toothrow; and 7 lower toothrow.
Comparison of glans penes between 2 new species, Microtus clarkei, and Volemys millicens. Mean values (in mm) are followed by ranges (in mm) in parenthesis.
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| Unidentified taxon from Mêdog | Unidentified taxon from Nyalam | |
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| 5 | 1 | 4 | 6 |
| LG | 3.48 (3.30–3.60) | 4.30 | 3.90 (3.80–4.00) | 4.42 (4.20–4.50) |
| DG | 1.80 (1.70–2.00) | 2.40 | 2.30 (2.20–2.40) | 2.58 (2.40–2.80) |
| Proximal baculum | Bone, sturdy, anterior part pole-like and the top even, proximal part rhombic. | Bone, anterior part trumpet-like. The top circinal. | Bone, very sturdy, anterior part pole-like and the top even, proximal part trapezium-like. | Bone, very sturdy, anterior part pole-like and the top even, proximal part shovel-like. |
| Distal baculum | Bone, sturdy, proximal part bulging and dentate in 2 sides. | Cartilaginous, and sturdy. | Bone, stick-like, proximal bulging. | Bone, stick-like, proximal bulging. |
| Lateral baculum | Bone, stick-like. | Cartilaginous, stick-like. | Bone, stick-like, short. | Bone, stick-like, only slightly ossified. |
| Dorsal papilla | Three forks, 2 of them located the back. | Coniform, single. | Coniform, single. | 50% coniform, and 50% two forks. |
| Outer crater papilla | 4–6 every side, obvious. | 2 on every sides, unobvious. | No obvious outer crater papilla. | 2–3 on every sides, unobvious. |
| Urethral lappet | Three forks; the middle fork very short. | Two forks. | Two forks. | Three forks and the same height. Very deeply divided and finger-like. |
| TLBB | 3.58 (3.50–3.70) | 4.00 | 3.56 (3.50–3.60) | 4.68 (4.60–4.80) |
| PBL | 2.36 (2.30–2.50) | 2.80 | 2.48 (2.45–2.50) | 3.02 (2.90–3.15) |
| WPBB | 1.34 (1.20–1.60) | 1.50 | 1.50 (1.40–1.60) | 1.58 (1.40–1.80) |
| WPBM | 0.33 (0.30–0.50) | 0.45 | 0.63 (0.60–0.65) | 0.47 (0.40–0.60) |
| HPBB | 0.66 (0.50–0.80) | 0.50 | 0.54 (0.45–0.60) | 0.58 (0.45–0.70) |
| DBL | 1.16 (1.00–1.20) | 1.00 | 1.00 (0.90–1.10) | 1.63 (1.60–1.70) |
| WDB | 0.52 (0.48–0.60) | 0.50 | 0.41 (0.30–0.50) | 0.57 (0.40–0.70) |
| LBL | 0.79 (0.70–0.90) | 0.70 | 0.68 (0.42–1.10) | 0.51 (0.35–0.75) |
Fig. 7.Comparison of the glans penis of the new species Neodon medogensis and Neodon nyalamensis with Microtus clarkei and Volemys millicens. A) N. medogensis; B) N. nyalamensis; C) N. clarkei; and D) V. millicens. 1: glans; 2: mid-ventral cut view; 3: dorsal papilla (A, C); 4: urethral lappet (A, C); 3, 4: dorsal papilla (B, D); 5: urethral lappet (B, D).