Literature DB >> 29662983

The recognition of glycans by protein receptors. Insights from NMR spectroscopy.

Ana Ardá1, Jesús Jiménez-Barbero.   

Abstract

Carbohydrates (glycans, saccharides, sugars) are everywhere. In fact, glycan-protein interactions are involved in many essential processes of life and disease. The understanding of the key structural details at the atomic and molecular level is of paramount importance to effectively design molecules for therapeutic purposes. Different approximations may be employed to decipher these molecular recognition processes with high resolution. Advances in cryo-electron microscopy are providing exquisite details on different biological mechanisms involving sugars, while better and better protocols for structural refinement in the application of X-ray methods for protein-sugar complexes and glycoproteins are also permitting fantastic advances in the glycoscience arena. Alternatively, NMR spectroscopy remains as one of the most rewarding techniques to explore protein-carbohydrate interactions. In fact, given the intrinsic dynamic nature of saccharides, NMR can afford exquisite structural information at the atomic detail, not accessible by other techniques. However, the access to this information is sometimes intricate, and requires careful analysis and well-defined strategies. In this review, we have highlighted these issues and presented an overview of different modern NMR approaches with a focus on the latest developments and challenges.

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Year:  2018        PMID: 29662983     DOI: 10.1039/c8cc01444b

Source DB:  PubMed          Journal:  Chem Commun (Camb)        ISSN: 1359-7345            Impact factor:   6.222


  20 in total

1.  CHARMM-GUI Glycan Modeler for modeling and simulation of carbohydrates and glycoconjugates.

Authors:  Sang-Jun Park; Jumin Lee; Yifei Qi; Nathan R Kern; Hui Sun Lee; Sunhwan Jo; InSuk Joung; Keehyung Joo; Jooyoung Lee; Wonpil Im
Journal:  Glycobiology       Date:  2019-04-01       Impact factor: 4.313

2.  Sparse isotope labeling for nuclear magnetic resonance (NMR) of glycoproteins using 13C-glucose.

Authors:  Monique J Rogals; Jeong-Yeh Yang; Robert V Williams; Kelley W Moremen; I Jonathan Amster; James H Prestegard
Journal:  Glycobiology       Date:  2021-05-03       Impact factor: 4.313

3.  Automated Glycan Assembly of 19 F-labeled Glycan Probes Enables High-Throughput NMR Studies of Protein-Glycan Interactions.

Authors:  Giulio Fittolani; Elena Shanina; Mónica Guberman; Peter H Seeberger; Christoph Rademacher; Martina Delbianco
Journal:  Angew Chem Int Ed Engl       Date:  2021-05-07       Impact factor: 15.336

4.  The study of multivalent carbohydrate-protein interactions by bio-layer interferometry.

Authors:  Eugénie Laigre; David Goyard; Claire Tiertant; Jérôme Dejeu; Olivier Renaudet
Journal:  Org Biomol Chem       Date:  2018-11-28       Impact factor: 3.876

5.  A post-translational modification of human Norovirus capsid protein attenuates glycan binding.

Authors:  Alvaro Mallagaray; Robert Creutznacher; Jasmin Dülfer; Philipp H O Mayer; Lena Lisbeth Grimm; Jose Maria Orduña; Esben Trabjerg; Thilo Stehle; Kasper D Rand; Bärbel S Blaum; Charlotte Uetrecht; Thomas Peters
Journal:  Nat Commun       Date:  2019-03-21       Impact factor: 14.919

6.  The two domains of human galectin-8 bind sialyl- and fucose-containing oligosaccharides in an independent manner. A 3D view by using NMR.

Authors:  Marcos Gómez-Redondo; Sandra Delgado; Reyes Núñez-Franco; Gonzalo Jiménez-Osés; Ana Ardá; Jesús Jiménez-Barbero; Ana Gimeno
Journal:  RSC Chem Biol       Date:  2021-04-12

7.  Cross-Linking Effects Dictate the Preference of Galectins to Bind LacNAc-Decorated HPMA Copolymers.

Authors:  Sara Bertuzzi; Ana Gimeno; Ane Martinez-Castillo; Marta G Lete; Sandra Delgado; Cristina Airoldi; Marina Rodrigues Tavares; Markéta Bláhová; Petr Chytil; Vladimír Křen; Nicola G A Abrescia; Ana Ardá; Pavla Bojarová; Jesús Jiménez-Barbero
Journal:  Int J Mol Sci       Date:  2021-06-01       Impact factor: 5.923

8.  Glycoconjugated Metallohelices have Improved Nuclear Delivery and Suppress Tumour Growth In Vivo.

Authors:  Hualong Song; Simon J Allison; Viktor Brabec; Hannah E Bridgewater; Jana Kasparkova; Hana Kostrhunova; Vojtech Novohradsky; Roger M Phillips; Jitka Pracharova; Nicola J Rogers; Samantha L Shepherd; Peter Scott
Journal:  Angew Chem Int Ed Engl       Date:  2020-07-07       Impact factor: 15.336

Review 9.  Glycan structures and their interactions with proteins. A NMR view.

Authors:  Ana Gimeno; Pablo Valverde; Ana Ardá; Jesús Jiménez-Barbero
Journal:  Curr Opin Struct Biol       Date:  2019-12-10       Impact factor: 6.809

Review 10.  Novel NMR Avenues to Explore the Conformation and Interactions of Glycans.

Authors:  Pablo Valverde; Jon I Quintana; Jose I Santos; Ana Ardá; Jesús Jiménez-Barbero
Journal:  ACS Omega       Date:  2019-08-19
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