Literature DB >> 29660780

Steroid-Based Amphiphiles for Membrane Protein Study: The Importance of Alkyl Spacers for Protein Stability.

Muhammad Ehsan1, Manabendra Das1, Valerie Stern2, Yang Du3, Jonas S Mortensen4, Parameswaran Hariharan2, Bernadette Byrne5, Claus J Loland4, Brian K Kobilka3, Lan Guan2, Pil Seok Chae1.   

Abstract

Membrane proteins allow effective communication between cells and organelles and their external environments. Maintaining membrane protein stability in a non-native environment is the major bottleneck to their structural study. Detergents are widely used to extract membrane proteins from the membrane and to keep the extracted protein in a stable state for downstream characterisation. In this study, three sets of steroid-based amphiphiles-glyco-diosgenin analogues (GDNs) and steroid-based pentasaccharides either lacking a linker (SPSs) or containing a linker (SPS-Ls)-have been developed as new chemical tools for membrane protein research. These detergents were tested with three membrane proteins in order to characterise their ability to extract membrane proteins from the membrane and to stabilise membrane proteins long-term. Some of the detergents, particularly the SPS-Ls, displayed favourable behaviour with the tested membrane proteins. This result indicates the potential utility of these detergents as chemical tools for membrane protein structural study and a critical role of the simple alkyl spacer in determining detergent efficacy.
© 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  amphiphiles; membrane proteins; molecular design; protein stability; steroids

Mesh:

Substances:

Year:  2018        PMID: 29660780      PMCID: PMC7238963          DOI: 10.1002/cbic.201800106

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  58 in total

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Authors:  Maria E Zoghbi; Rebecca S Cooper; Guillermo A Altenberg
Journal:  J Biol Chem       Date:  2016-01-02       Impact factor: 5.157

2.  Amphipols from A to Z.

Authors:  J-L Popot; T Althoff; D Bagnard; J-L Banères; P Bazzacco; E Billon-Denis; L J Catoire; P Champeil; D Charvolin; M J Cocco; G Crémel; T Dahmane; L M de la Maza; C Ebel; F Gabel; F Giusti; Y Gohon; E Goormaghtigh; E Guittet; J H Kleinschmidt; W Kühlbrandt; C Le Bon; K L Martinez; M Picard; B Pucci; J N Sachs; C Tribet; C van Heijenoort; F Wien; F Zito; M Zoonens
Journal:  Annu Rev Biophys       Date:  2011       Impact factor: 12.981

3.  A new class of amphiphiles bearing rigid hydrophobic groups for solubilization and stabilization of membrane proteins.

Authors:  Pil Seok Chae; Søren G F Rasmussen; Rohini R Rana; Kamil Gotfryd; Andrew C Kruse; Aashish Manglik; Kyung Ho Cho; Shailika Nurva; Ulrik Gether; Lan Guan; Claus J Loland; Bernadette Byrne; Brian K Kobilka; Samuel H Gellman
Journal:  Chemistry       Date:  2012-06-22       Impact factor: 5.236

4.  Crystal structure of a bacterial homologue of Na+/Cl--dependent neurotransmitter transporters.

Authors:  Atsuko Yamashita; Satinder K Singh; Toshimitsu Kawate; Yan Jin; Eric Gouaux
Journal:  Nature       Date:  2005-07-24       Impact factor: 49.962

5.  Glucose-neopentyl glycol (GNG) amphiphiles for membrane protein study.

Authors:  Pil Seok Chae; Rohini R Rana; Kamil Gotfryd; Søren G F Rasmussen; Andrew C Kruse; Kyung Ho Cho; Stefano Capaldi; Emil Carlsson; Brian Kobilka; Claus J Loland; Ulrik Gether; Surajit Banerjee; Bernadette Byrne; John K Lee; Samuel H Gellman
Journal:  Chem Commun (Camb)       Date:  2013-03-21       Impact factor: 6.222

Review 6.  Protein modulation of lipids, and vice-versa, in membranes.

Authors:  Derek Marsh
Journal:  Biochim Biophys Acta       Date:  2008-02-07

7.  Glycosyl-Substituted Dicarboxylates as Detergents for the Extraction, Overstabilization, and Crystallization of Membrane Proteins.

Authors:  Kim-Anh Nguyen; Marine Peuchmaur; Sandrine Magnard; Romain Haudecoeur; Cédric Boyère; Saravanan Mounien; Ikram Benammar; Veronica Zampieri; Sébastien Igonet; Vincent Chaptal; Anass Jawhari; Ahcène Boumendjel; Pierre Falson
Journal:  Angew Chem Int Ed Engl       Date:  2018-02-13       Impact factor: 15.336

8.  Expression, purification and in vitro functional reconstitution of the chemokine receptor CCR1.

Authors:  Samantha J Allen; Sofia Ribeiro; Richard Horuk; Tracy M Handel
Journal:  Protein Expr Purif       Date:  2009-03-09       Impact factor: 1.650

9.  Nanoparticle self-assembly in mixtures of phospholipids with styrene/maleic acid copolymers or fluorinated surfactants.

Authors:  Carolyn Vargas; Rodrigo Cuevas Arenas; Erik Frotscher; Sandro Keller
Journal:  Nanoscale       Date:  2015-11-24       Impact factor: 7.790

10.  A Class of Rigid Linker-bearing Glucosides for Membrane Protein Structural Study.

Authors:  Aiman Sadaf; Jonas S Mortensen; Stefano Capaldi; Elena Tikhonova; Parameswaran Hariharan; Orquidea de Castro Ribeiro; Claus J Loland; Lan Guan; Bernadette Byrne; Pil Seok Chae
Journal:  Chem Sci       Date:  2015-12-16       Impact factor: 9.825

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  1 in total

Review 1.  Methods for the solubilisation of membrane proteins: the micelle-aneous world of membrane protein solubilisation.

Authors:  Giedre Ratkeviciute; Benjamin F Cooper; Timothy J Knowles
Journal:  Biochem Soc Trans       Date:  2021-08-27       Impact factor: 5.407

  1 in total

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