Literature DB >> 29660237

Multiplexed Isobaric Tag-Based Profiling of Seven Murine Tissues Following In Vivo Nicotine Treatment Using a Minimalistic Proteomics Strategy.

Joao A Paulo1, Mark P Jedrychowski1,2, Edward T Chouchani1,2, Lawrence Kazak1, Steven P Gygi1.   

Abstract

Nicotine is a major addictive compound in tobacco and a component of smoking-related products, such as e-cigarettes. Once internalized, nicotine can perturb many cellular pathways and can induce alterations in proteins across different cell types; however, the mechanisms thereof remain undetermined. The authors hypothesize that both tissue-specific and global protein abundance alterations result from nicotine exposure. Presented here is the first proteomic profiling of multiple tissues from mice treated orally with nicotine. Proteins extracted from seven tissues (brain, heart, kidney, liver, lung, pancreas, and spleen) from treated (n = 5) and untreated control (n = 5) mice are assembled into a TMT10-plex experiment. A minimalistic proteomics strategy is employed using TMT reagents efficiently and centrifugation-based reversed-phase columns to streamline sample preparation. Combined, over 11 000 non-redundant proteins from over 138 000 different peptides are quantified in seven TMT10-plex experiments. Between 7 and 126 proteins are significantly altered in tissues from nicotine-exposed mice, 11 which are altered in two or more tissues. Our data showcase the vast extent of nicotine exposure across murine tissue.
© 2018 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  SPS-MS3; TMT; lumos; multi-notch

Mesh:

Substances:

Year:  2018        PMID: 29660237      PMCID: PMC5992107          DOI: 10.1002/pmic.201700326

Source DB:  PubMed          Journal:  Proteomics        ISSN: 1615-9853            Impact factor:   3.984


  57 in total

1.  Effect of nicotine and epinephrine on in vivo coagulation time in rabbits.

Authors:  D G WENZEL; J SINGH
Journal:  J Pharm Sci       Date:  1962-09       Impact factor: 3.534

2.  Role of alpha7 nicotinic acetylcholine receptor in calcium signaling induced by prion protein interaction with stress-inducible protein 1.

Authors:  Flavio H Beraldo; Camila P Arantes; Tiago G Santos; Nicolle G T Queiroz; Kirk Young; R Jane Rylett; Regina P Markus; Marco A M Prado; Vilma R Martins
Journal:  J Biol Chem       Date:  2010-09-13       Impact factor: 5.157

3.  Nicotine alters the proteome of two human pancreatic duct cell lines.

Authors:  Joao A Paulo
Journal:  JOP       Date:  2014-09-28

4.  Nicotine-induced protein expression profiling reveals mutually altered proteins across four human cell lines.

Authors:  Joao A Paulo; Steven P Gygi
Journal:  Proteomics       Date:  2016-12-21       Impact factor: 3.984

5.  Multiplexed Phosphoproteomic Profiling Using Titanium Dioxide and Immunoaffinity Enrichments Reveals Complementary Phosphorylation Events.

Authors:  Anthony P Possemato; Joao A Paulo; Daniel Mulhern; Ailan Guo; Steven P Gygi; Sean A Beausoleil
Journal:  J Proteome Res       Date:  2017-02-24       Impact factor: 4.466

6.  Quantification of PPAR-gamma protein in monocyte/macrophages from healthy smokers and non-smokers: a possible direct effect of nicotine.

Authors:  Angela Amoruso; Claudio Bardelli; Gabriele Gunella; Luigia Grazia Fresu; Valeria Ferrero; Sandra Brunelleschi
Journal:  Life Sci       Date:  2007-07-28       Impact factor: 5.037

7.  Platelet activation, adhesion, inflammation, and aggregation potential are altered in the presence of electronic cigarette extracts of variable nicotine concentrations.

Authors:  Sarah Hom; Li Chen; Tony Wang; Berhane Ghebrehiwet; Wei Yin; David A Rubenstein
Journal:  Platelets       Date:  2016-04-20       Impact factor: 3.862

8.  Enrichr: a comprehensive gene set enrichment analysis web server 2016 update.

Authors:  Maxim V Kuleshov; Matthew R Jones; Andrew D Rouillard; Nicolas F Fernandez; Qiaonan Duan; Zichen Wang; Simon Koplev; Sherry L Jenkins; Kathleen M Jagodnik; Alexander Lachmann; Michael G McDermott; Caroline D Monteiro; Gregory W Gundersen; Avi Ma'ayan
Journal:  Nucleic Acids Res       Date:  2016-05-03       Impact factor: 16.971

9.  MS3 eliminates ratio distortion in isobaric multiplexed quantitative proteomics.

Authors:  Lily Ting; Ramin Rad; Steven P Gygi; Wilhelm Haas
Journal:  Nat Methods       Date:  2011-10-02       Impact factor: 28.547

10.  Calcium binding promotes prion protein fragment 90-231 conformational change toward a membrane destabilizing and cytotoxic structure.

Authors:  Sacha Sorrentino; Tonino Bucciarelli; Alessandro Corsaro; Alessio Tosatto; Stefano Thellung; Valentina Villa; M Eugenia Schininà; Bruno Maras; Roberta Galeno; Luca Scotti; Francesco Creati; Alessandro Marrone; Nazzareno Re; Antonio Aceto; Tullio Florio; Michele Mazzanti
Journal:  PLoS One       Date:  2012-07-11       Impact factor: 3.240

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  9 in total

1.  Streamlined Tandem Mass Tag (SL-TMT) Protocol: An Efficient Strategy for Quantitative (Phospho)proteome Profiling Using Tandem Mass Tag-Synchronous Precursor Selection-MS3.

Authors:  José Navarrete-Perea; Qing Yu; Steven P Gygi; Joao A Paulo
Journal:  J Proteome Res       Date:  2018-05-16       Impact factor: 4.466

2.  Brain Region-Specific nAChR and Associated Protein Abundance Alterations Following Chronic Nicotine and/or Menthol Exposure.

Authors:  Matthew J Mulcahy; Stephanie M Huard; Joao A Paulo; Jonathan H Wang; Sheri McKinney; Brandon J Henderson; Henry A Lester
Journal:  J Proteome Res       Date:  2019-10-28       Impact factor: 4.466

3.  Strain-Specific Peptide (SSP) Interference Reference Sample: A Genetically Encoded Quality Control for Isobaric Tagging Strategies.

Authors:  Tian Zhang; Greg R Keele; Gary A Churchill; Steven P Gygi; Joao A Paulo
Journal:  Anal Chem       Date:  2021-03-18       Impact factor: 6.986

4.  Enrichment of Neurodegenerative Microglia Signature in Brain-Derived Extracellular Vesicles Isolated from Alzheimer's Disease Mouse Models.

Authors:  Satoshi Muraoka; Mark P Jedrychowski; Naotoshi Iwahara; Mohammad Abdullah; Kristen D Onos; Kelly J Keezer; Jianqiao Hu; Seiko Ikezu; Gareth R Howell; Steven P Gygi; Tsuneya Ikezu
Journal:  J Proteome Res       Date:  2021-02-03       Impact factor: 4.466

5.  Temporal proteomic changes induced by nicotine in human cells: A quantitative proteomics approach.

Authors:  José Navarrete-Perea; Steven P Gygi; Joao A Paulo
Journal:  J Proteomics       Date:  2021-04-23       Impact factor: 3.855

6.  Proteomic Profiling of Extracellular Vesicles Isolated From Cerebrospinal Fluid of Former National Football League Players at Risk for Chronic Traumatic Encephalopathy.

Authors:  Satoshi Muraoka; Mark P Jedrychowski; Harutsugu Tatebe; Annina M DeLeo; Seiko Ikezu; Takahiko Tokuda; Steven P Gygi; Robert A Stern; Tsuneya Ikezu
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7.  Emerging mass spectrometry-based proteomics methodologies for novel biomedical applications.

Authors:  Lindsay K Pino; Jacob Rose; Amy O'Broin; Samah Shah; Birgit Schilling
Journal:  Biochem Soc Trans       Date:  2020-10-30       Impact factor: 5.407

8.  Evaluation of Differential Peptide Loading on Tandem Mass Tag-Based Proteomic and Phosphoproteomic Data Quality.

Authors:  James A Sanford; Yang Wang; Joshua R Hansen; Marina A Gritsenko; Karl K Weitz; Tyler J Sagendorf; Cristina E Tognon; Vladislav A Petyuk; Wei-Jun Qian; Tao Liu; Brian J Druker; Karin D Rodland; Paul D Piehowski
Journal:  J Am Soc Mass Spectrom       Date:  2021-11-23       Impact factor: 3.109

9.  Sex Differences in the Ventral Tegmental Area and Nucleus Accumbens Proteome at Baseline and Following Nicotine Exposure.

Authors:  Angela M Lee; Mohammad Shahid Mansuri; Rashaun S Wilson; TuKiet T Lam; Angus C Nairn; Marina R Picciotto
Journal:  Front Mol Neurosci       Date:  2021-07-14       Impact factor: 5.639

  9 in total

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