Literature DB >> 29650369

SPT and Imaging FCS Provide Complementary Information on the Dynamics of Plasma Membrane Molecules.

Marie-Lena I E Harwardt1, Marina S Dietz1, Mike Heilemann2, Thorsten Wohland3.   

Abstract

The dynamics of biomolecules in the plasma membrane is of fundamental importance to understanding cellular processes. Cellular signaling often starts with extracellular ligand binding to a membrane receptor, which then transduces an intracellular signal. Ligand binding and receptor-complex activation often involve a complex rearrangement of proteins in the membrane, which results in changes in diffusion properties. Two widely used methods to characterize biomolecular diffusion are single-particle tracking (SPT) and imaging total internal reflection fluorescence correlation spectroscopy (ITIR-FCS). Here, we compare the results of recovered diffusion coefficients and mean-square displacements of the two methods by simulations of free, domain-confined, or meshwork diffusion. We introduce, to our knowledge, a new method for the determination of confinement radii from ITIR-FCS data. We further establish and demonstrate simultaneous SPT/ITIR-FCS for direct comparison within living cells. Finally, we compare the results obtained by SPT and ITIR-FCS for the receptor tyrosine kinase MET. Our results show that SPT and ITIR-FCS yield complementary information on diffusion properties of biomolecules in cell membranes.
Copyright © 2018 Biophysical Society. Published by Elsevier Inc. All rights reserved.

Mesh:

Year:  2018        PMID: 29650369      PMCID: PMC6129459          DOI: 10.1016/j.bpj.2018.03.013

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  59 in total

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Journal:  Biophys J       Date:  2010-11-03       Impact factor: 4.033

2.  ImFCS: a software for imaging FCS data analysis and visualization.

Authors:  Jagadish Sankaran; Xianke Shi; Liang Yoong Ho; Ernst H K Stelzer; Thorsten Wohland
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3.  Imaging fluorescence (cross-) correlation spectroscopy in live cells and organisms.

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Review 5.  Harnessing actin dynamics for clathrin-mediated endocytosis.

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6.  Molecular diffusion measurement in lipid bilayers over wide concentration ranges: a comparative study.

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Journal:  Chemphyschem       Date:  2008-04-04       Impact factor: 3.102

7.  High-density mapping of single-molecule trajectories with photoactivated localization microscopy.

Authors:  Suliana Manley; Jennifer M Gillette; George H Patterson; Hari Shroff; Harald F Hess; Eric Betzig; Jennifer Lippincott-Schwartz
Journal:  Nat Methods       Date:  2008-01-13       Impact factor: 28.547

8.  Fluorescence recovery after photobleaching (FRAP): acquisition, analysis, and applications.

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Journal:  Methods Mol Biol       Date:  2015

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10.  Objective comparison of particle tracking methods.

Authors:  Nicolas Chenouard; Ihor Smal; Fabrice de Chaumont; Martin Maška; Ivo F Sbalzarini; Yuanhao Gong; Janick Cardinale; Craig Carthel; Stefano Coraluppi; Mark Winter; Andrew R Cohen; William J Godinez; Karl Rohr; Yannis Kalaidzidis; Liang Liang; James Duncan; Hongying Shen; Yingke Xu; Klas E G Magnusson; Joakim Jaldén; Helen M Blau; Perrine Paul-Gilloteaux; Philippe Roudot; Charles Kervrann; François Waharte; Jean-Yves Tinevez; Spencer L Shorte; Joost Willemse; Katherine Celler; Gilles P van Wezel; Han-Wei Dan; Yuh-Show Tsai; Carlos Ortiz de Solórzano; Jean-Christophe Olivo-Marin; Erik Meijering
Journal:  Nat Methods       Date:  2014-01-19       Impact factor: 28.547

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Journal:  Mol Biol Cell       Date:  2019-04-10       Impact factor: 4.138

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4.  Unraveling the hidden temporal range of fast β2-adrenergic receptor mobility by time-resolved fluorescence.

Authors:  Ashwin Balakrishnan; Katherina Hemmen; Susobhan Choudhury; Jan-Hagen Krohn; Kerstin Jansen; Mike Friedrich; Gerti Beliu; Markus Sauer; Martin J Lohse; Katrin G Heinze
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