Literature DB >> 29645339

Nucleophile Promiscuity of Natural and Engineered Aldolases.

Karel Hernández1, Anna Szekrenyi2, Pere Clapés1.   

Abstract

The asymmetric aldol addition reaction mediated by aldolases is recognized as a green and sustainable method for carbon-carbon bond formation. Research in this area has unveiled their unprecedented synthetic potential toward diverse, new chemical structures; novel product families; and even as a technology for industrial manufacturing processes. Despite these advances, aldolases have long been regarded as strictly selective catalysts, particularly for nucleophilic substrates, which limits their broad applicability. In recent years, advances in screening technologies and metagenomics have uncovered novel C-C biocatalysts from superfamilies of widely known lyases. Moreover, protein engineering has revealed the extraordinary malleability of different carboligases to offer a toolbox of biocatalysts active towards a large structural diversity of nucleophile substrates. Herein, the nucleophile ambiguity of native and engineered aldolases is discussed with recent examples to prove this novel concept.
© 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  aldol reaction; asymmetric synthesis; biocatalysis; enzymes; protein engineering

Mesh:

Substances:

Year:  2018        PMID: 29645339     DOI: 10.1002/cbic.201800135

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  6 in total

1.  Screening and characterization of a diverse panel of metagenomic imine reductases for biocatalytic reductive amination.

Authors:  James R Marshall; Peiyuan Yao; Sarah L Montgomery; James D Finnigan; Thomas W Thorpe; Ryan B Palmer; Juan Mangas-Sanchez; Richard A M Duncan; Rachel S Heath; Kirsty M Graham; Darren J Cook; Simon J Charnock; Nicholas J Turner
Journal:  Nat Chem       Date:  2020-12-30       Impact factor: 24.427

2.  Asymmetric assembly of high-value α-functionalized organic acids using a biocatalytic chiral-group-resetting process.

Authors:  Wei Song; Jin-Hui Wang; Jing Wu; Jia Liu; Xiu-Lai Chen; Li-Ming Liu
Journal:  Nat Commun       Date:  2018-09-19       Impact factor: 14.919

Review 3.  Current state of and need for enzyme engineering of 2-deoxy-D-ribose 5-phosphate aldolases and its impact.

Authors:  Juha Rouvinen; Martina Andberg; Johan Pääkkönen; Nina Hakulinen; Anu Koivula
Journal:  Appl Microbiol Biotechnol       Date:  2021-08-19       Impact factor: 4.813

4.  Structurally Informed Mutagenesis of a Stereochemically Promiscuous Aldolase Produces Mutants That Catalyze the Diastereoselective Syntheses of All Four Stereoisomers of 3-Deoxy-hexulosonic Acid.

Authors:  Sylvain F Royer; Xuan Gao; Robin R Groleau; Marc W van der Kamp; Steven D Bull; Michael J Danson; Susan J Crennell
Journal:  ACS Catal       Date:  2022-09-06       Impact factor: 13.700

Review 5.  2-Deoxy-D-ribose-5-phosphate aldolase (DERA): applications and modifications.

Authors:  Meera Haridas; Eman M M Abdelraheem; Ulf Hanefeld
Journal:  Appl Microbiol Biotechnol       Date:  2018-10-03       Impact factor: 4.813

6.  Substrate specificity of 2-deoxy-D-ribose 5-phosphate aldolase (DERA) assessed by different protein engineering and machine learning methods.

Authors:  Sanni Voutilainen; Markus Heinonen; Martina Andberg; Emmi Jokinen; Hannu Maaheimo; Johan Pääkkönen; Nina Hakulinen; Juha Rouvinen; Harri Lähdesmäki; Samuel Kaski; Juho Rousu; Merja Penttilä; Anu Koivula
Journal:  Appl Microbiol Biotechnol       Date:  2020-11-04       Impact factor: 4.813

  6 in total

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