Literature DB >> 33380742

Screening and characterization of a diverse panel of metagenomic imine reductases for biocatalytic reductive amination.

James R Marshall1, Peiyuan Yao1,2, Sarah L Montgomery1, James D Finnigan3, Thomas W Thorpe1, Ryan B Palmer1, Juan Mangas-Sanchez1, Richard A M Duncan3, Rachel S Heath1, Kirsty M Graham3, Darren J Cook3, Simon J Charnock3, Nicholas J Turner4.   

Abstract

Finding faster and simpler ways to screen protein sequence space to enable the identification of new biocatalysts for asymmetric synthesis remains both a challenge and a rate-limiting step in enzyme discovery. Biocatalytic strategies for the synthesis of chiral amines are increasingly attractive and include enzymatic asymmetric reductive amination, which offers an efficient route to many of these high-value compounds. Here we report the discovery of over 300 new imine reductases and the production of a large (384 enzymes) and sequence-diverse panel of imine reductases available for screening. We also report the development of a facile high-throughput screen to interrogate their activity. Through this approach we identified imine reductase biocatalysts capable of accepting structurally demanding ketones and amines, which include the preparative synthesis of N-substituted β-amino ester derivatives via a dynamic kinetic resolution process, with excellent yields and stereochemical purities.

Entities:  

Year:  2020        PMID: 33380742      PMCID: PMC7116802          DOI: 10.1038/s41557-020-00606-w

Source DB:  PubMed          Journal:  Nat Chem        ISSN: 1755-4330            Impact factor:   24.427


  41 in total

1.  Design and evolution of an enzyme with a non-canonical organocatalytic mechanism.

Authors:  Ashleigh J Burke; Sarah L Lovelock; Amina Frese; Rebecca Crawshaw; Mary Ortmayer; Mark Dunstan; Colin Levy; Anthony P Green
Journal:  Nature       Date:  2019-05-27       Impact factor: 49.962

Review 2.  Contemporary screening approaches to reaction discovery and development.

Authors:  Karl D Collins; Tobias Gensch; Frank Glorius
Journal:  Nat Chem       Date:  2014-10       Impact factor: 24.427

3.  Enantioselective Hydrogen Atom Transfer: Discovery of Catalytic Promiscuity in Flavin-Dependent 'Ene'-Reductases.

Authors:  Braddock A Sandoval; Andrew J Meichan; Todd K Hyster
Journal:  J Am Chem Soc       Date:  2017-08-11       Impact factor: 15.419

4.  Optimization of Enzyme Mechanism along the Evolutionary Trajectory of a Computationally Designed (Retro-)Aldolase.

Authors:  Cathleen Zeymer; Reinhard Zschoche; Donald Hilvert
Journal:  J Am Chem Soc       Date:  2017-08-28       Impact factor: 15.419

Review 5.  Emerging strategies for expanding the toolbox of enzymes in biocatalysis.

Authors:  Braddock A Sandoval; Todd K Hyster
Journal:  Curr Opin Chem Biol       Date:  2020-01-11       Impact factor: 8.822

6.  Directed evolution of cytochrome c for carbon-silicon bond formation: Bringing silicon to life.

Authors:  S B Jennifer Kan; Russell D Lewis; Kai Chen; Frances H Arnold
Journal:  Science       Date:  2016-11-25       Impact factor: 47.728

7.  A simple, multidimensional approach to high-throughput discovery of catalytic reactions.

Authors:  Daniel W Robbins; John F Hartwig
Journal:  Science       Date:  2011-09-09       Impact factor: 47.728

8.  Cobalt precursors for high-throughput discovery of base metal asymmetric alkene hydrogenation catalysts.

Authors:  Max R Friedfeld; Michael Shevlin; Jordan M Hoyt; Shane W Krska; Matthew T Tudge; Paul J Chirik
Journal:  Science       Date:  2013-11-29       Impact factor: 47.728

Review 9.  High Throughput Screening and Selection Methods for Directed Enzyme Evolution.

Authors:  Han Xiao; Zehua Bao; Huimin Zhao
Journal:  Ind Eng Chem Res       Date:  2014-10-03       Impact factor: 3.720

10.  Label-assisted mass spectrometry for the acceleration of reaction discovery and optimization.

Authors:  Jaime R Cabrera-Pardo; David I Chai; Song Liu; Milan Mrksich; Sergey A Kozmin
Journal:  Nat Chem       Date:  2013-03-31       Impact factor: 24.427

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  8 in total

1.  Multifunctional biocatalyst for conjugate reduction and reductive amination.

Authors:  Thomas W Thorpe; James R Marshall; Vanessa Harawa; Rebecca E Ruscoe; Anibal Cuetos; James D Finnigan; Antonio Angelastro; Rachel S Heath; Fabio Parmeggiani; Simon J Charnock; Roger M Howard; Rajesh Kumar; David S B Daniels; Gideon Grogan; Nicholas J Turner
Journal:  Nature       Date:  2022-04-06       Impact factor: 49.962

Review 2.  Reductive aminations by imine reductases: from milligrams to tons.

Authors:  Amelia K Gilio; Thomas W Thorpe; Nicholas Turner; Gideon Grogan
Journal:  Chem Sci       Date:  2022-04-07       Impact factor: 9.969

3.  Enzymatic N-Allylation of Primary and Secondary Amines Using Renewable Cinnamic Acids Enabled by Bacterial Reductive Aminases.

Authors:  Godwin A Aleku; Gabriel R Titchiner; George W Roberts; Sasha R Derrington; James R Marshall; Florian Hollfelder; Nicholas J Turner; David Leys
Journal:  ACS Sustain Chem Eng       Date:  2022-05-06       Impact factor: 9.224

4.  Rapid Screening of Diverse Biotransformations for Enzyme Evolution.

Authors:  Emily E Kempa; James L Galman; Fabio Parmeggiani; James R Marshall; Julien Malassis; Clement Q Fontenelle; Jean-Baptiste Vendeville; Bruno Linclau; Simon J Charnock; Sabine L Flitsch; Nicholas J Turner; Perdita E Barran
Journal:  JACS Au       Date:  2021-04-08

5.  Asymmetric Synthesis of N-Substituted α-Amino Esters from α-Ketoesters via Imine Reductase-Catalyzed Reductive Amination.

Authors:  Peiyuan Yao; James R Marshall; Zefei Xu; Jesmine Lim; Simon J Charnock; Dunming Zhu; Nicholas J Turner
Journal:  Angew Chem Int Ed Engl       Date:  2021-03-09       Impact factor: 15.336

6.  Machine learning modeling of family wide enzyme-substrate specificity screens.

Authors:  Samuel Goldman; Ria Das; Kevin K Yang; Connor W Coley
Journal:  PLoS Comput Biol       Date:  2022-02-10       Impact factor: 4.475

Review 7.  Recent trends in biocatalysis.

Authors:  Dong Yi; Thomas Bayer; Christoffel P S Badenhorst; Shuke Wu; Mark Doerr; Matthias Höhne; Uwe T Bornscheuer
Journal:  Chem Soc Rev       Date:  2021-06-18       Impact factor: 60.615

Review 8.  New Trends and Future Opportunities in the Enzymatic Formation of C-C, C-N, and C-O bonds.

Authors:  Jack J Sangster; James R Marshall; Nicholas J Turner; Juan Mangas-Sanchez
Journal:  Chembiochem       Date:  2021-11-24       Impact factor: 3.461

  8 in total

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