Literature DB >> 29627711

Simple DNA extraction of urine samples: Effects of storage temperature and storage time.

Huey Hian Ng1, Hwee Chen Ang2, See Ying Hoe2, Mae-Lynn Lim2, Hua Eng Tai2, Richard Choon Hock Soh3, Christopher Kiu-Choong Syn2.   

Abstract

Urine samples are commonly analysed in cases with suspected illicit drug consumption. In events of alleged sample mishandling, urine sample source identification may be necessary. A simple DNA extraction procedure suitable for STR typing of urine samples was established on the Promega Maxwell® 16 paramagnetic silica bead platform. A small sample volume of 1.7mL was used. Samples were stored at room temperature, 4°C and -20°C for 100days to investigate the influence of storage temperature and time on extracted DNA quantity and success rate of STR typing. Samples stored at room temperature exhibited a faster decline in DNA yield with time and lower typing success rates as compared to those at 4°C and -20°C. This trend can likely be attributed to DNA degradation. In conclusion, this study presents a quick and effective DNA extraction protocol from a small urine volume stored for up to 100days at 4°C and -20°C.
Copyright © 2018 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  DNA extraction; Maxwell 16; Storage condition; Urine sample

Mesh:

Substances:

Year:  2018        PMID: 29627711     DOI: 10.1016/j.forsciint.2018.03.035

Source DB:  PubMed          Journal:  Forensic Sci Int        ISSN: 0379-0738            Impact factor:   2.395


  5 in total

1.  Detecting HbE Gene Using DNA Extracted from Urine Sediments by Chelex-plus-Heating Technique.

Authors:  Areerat Pankham; Thanusak Tatu
Journal:  J Biomol Tech       Date:  2020-09

2.  Automated DNA, RNA, and Protein Extraction from Urine for Biobanking.

Authors:  Caroline Barau; Pascale Maillé; Nanor Sirab; Bijan Ghaleh; Yves Allory
Journal:  J Biomol Tech       Date:  2022-02-06

3.  Thermal Effects on DNA Degradation in Blood and Seminal Stains: Forensic View.

Authors:  Randa H Abdel Hady; Hayam Z Thabet; Noha Esmael Ebrahem; Heba A Yassa
Journal:  Acad Forensic Pathol       Date:  2021-03-19

Review 4.  The correlation between the level of 3-hydroxypropyl mercapturic acid, CYP2B6 polymorphisms, and hematuria occurrences after cyclophosphamide administration and its bioanalytical methods: A systematic review.

Authors:  Yahdiana Harahap; Farhan Nurahman; Denni Joko Purwanto; Arry Yanuar
Journal:  Heliyon       Date:  2021-10-04

5.  Interpreting Mixture Profiles: Comparison between Precision ID GlobalFiler™ NGS STR Panel v2 and Traditional Methods.

Authors:  Michele Ragazzo; Stefania Carboni; Valerio Caputo; Carlotta Buttini; Laura Manzo; Valeria Errichiello; Giulio Puleri; Emiliano Giardina
Journal:  Genes (Basel)       Date:  2020-05-26       Impact factor: 4.096

  5 in total

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