Literature DB >> 29618591

Biology in Bloom: A Primer on the Arabidopsis thaliana Model System.

Andrew W Woodward1,2, Bonnie Bartel3.   

Abstract

Arabidopsis thaliana could have easily escaped human scrutiny. Instead, Arabidopsis has become the most widely studied plant in modern biology despite its absence from the dinner table. Pairing diminutive stature and genome with prodigious resources and tools, Arabidopsis offers a window into the molecular, cellular, and developmental mechanisms underlying life as a multicellular photoautotroph. Many basic discoveries made using this plant have spawned new research areas, even beyond the verdant fields of plant biology. With a suite of resources and tools unmatched among plants and rivaling other model systems, Arabidopsis research continues to offer novel insights and deepen our understanding of fundamental biological processes.
Copyright © 2018 by the Genetics Society of America.

Entities:  

Keywords:  model organism; reference plant

Mesh:

Year:  2018        PMID: 29618591      PMCID: PMC5887134          DOI: 10.1534/genetics.118.300755

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  108 in total

Review 1.  An early Arabidopsis demonstration. Resolving a few issues concerning photorespiration.

Authors:  C R Somerville
Journal:  Plant Physiol       Date:  2001-01       Impact factor: 8.340

Review 2.  Developmental bases for key innovations in the seed-plant microgametophyte.

Authors:  Paula J Rudall; Richard M Bateman
Journal:  Trends Plant Sci       Date:  2007-06-26       Impact factor: 18.313

Review 3.  Seed banks and molecular maps: unlocking genetic potential from the wild.

Authors:  S D Tanksley; S R McCouch
Journal:  Science       Date:  1997-08-22       Impact factor: 47.728

4.  Multidisciplinary perspectives on banana (Musa spp.) domestication.

Authors:  Xavier Perrier; Edmond De Langhe; Mark Donohue; Carol Lentfer; Luc Vrydaghs; Frédéric Bakry; Françoise Carreel; Isabelle Hippolyte; Jean-Pierre Horry; Christophe Jenny; Vincent Lebot; Ange-Marie Risterucci; Kodjo Tomekpe; Hugues Doutrelepont; Terry Ball; Jason Manwaring; Pierre de Maret; Tim Denham
Journal:  Proc Natl Acad Sci U S A       Date:  2011-07-05       Impact factor: 11.205

5.  teosinte branched1 and the origin of maize: evidence for epistasis and the evolution of dominance.

Authors:  J Doebley; A Stec; C Gustus
Journal:  Genetics       Date:  1995-09       Impact factor: 4.562

6.  GL3 encodes a bHLH protein that regulates trichome development in arabidopsis through interaction with GL1 and TTG1.

Authors:  C T Payne; F Zhang; A M Lloyd
Journal:  Genetics       Date:  2000-11       Impact factor: 4.562

7.  Genome-wide insertional mutagenesis of Arabidopsis thaliana.

Authors:  José M Alonso; Anna N Stepanova; Thomas J Leisse; Christopher J Kim; Huaming Chen; Paul Shinn; Denise K Stevenson; Justin Zimmerman; Pascual Barajas; Rosa Cheuk; Carmelita Gadrinab; Collen Heller; Albert Jeske; Eric Koesema; Cristina C Meyers; Holly Parker; Lance Prednis; Yasser Ansari; Nathan Choy; Hashim Deen; Michael Geralt; Nisha Hazari; Emily Hom; Meagan Karnes; Celene Mulholland; Ral Ndubaku; Ian Schmidt; Plinio Guzman; Laura Aguilar-Henonin; Markus Schmid; Detlef Weigel; David E Carter; Trudy Marchand; Eddy Risseeuw; Debra Brogden; Albana Zeko; William L Crosby; Charles C Berry; Joseph R Ecker
Journal:  Science       Date:  2003-08-01       Impact factor: 47.728

8.  The ATG12-conjugating enzyme ATG10 Is essential for autophagic vesicle formation in Arabidopsis thaliana.

Authors:  Allison R Phillips; Anongpat Suttangkakul; Richard D Vierstra
Journal:  Genetics       Date:  2008-02-03       Impact factor: 4.562

9.  An "Electronic Fluorescent Pictograph" browser for exploring and analyzing large-scale biological data sets.

Authors:  Debbie Winter; Ben Vinegar; Hardeep Nahal; Ron Ammar; Greg V Wilson; Nicholas J Provart
Journal:  PLoS One       Date:  2007-08-08       Impact factor: 3.240

10.  Competitive binding of antagonistic peptides fine-tunes stomatal patterning.

Authors:  Jin Suk Lee; Marketa Hnilova; Michal Maes; Ya-Chen Lisa Lin; Aarthi Putarjunan; Soon-Ki Han; Julian Avila; Keiko U Torii
Journal:  Nature       Date:  2015-06-17       Impact factor: 49.962

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  6 in total

1.  Assessment of two statistical approaches for variance genome-wide association studies in plants.

Authors:  Matthew D Murphy; Samuel B Fernandes; Gota Morota; Alexander E Lipka
Journal:  Heredity (Edinb)       Date:  2022-05-10       Impact factor: 3.832

2.  Arabidopsis thaliana endonuclease V is a ribonuclease specific for inosine-containing single-stranded RNA.

Authors:  Megumi Endo; Jung In Kim; Narumi Aoki Shioi; Shigenori Iwai; Isao Kuraoka
Journal:  Open Biol       Date:  2021-10-20       Impact factor: 6.411

3.  Isolation and Comprehensive in Silico Characterisation of a New 3-Hydroxy-3-Methylglutaryl-Coenzyme A Reductase 4 (HMGR4) Gene Promoter from Salvia miltiorrhiza: Comparative Analyses of Plant HMGR Promoters.

Authors:  Małgorzata Majewska; Łukasz Kuźma; Piotr Szymczyk
Journal:  Plants (Basel)       Date:  2022-07-16

4.  A high throughput method for quantifying number and size distribution of Arabidopsis seeds using large particle flow cytometry.

Authors:  Alejandro Morales; J Teapal; J M H Ammerlaan; X Yin; J B Evers; N P R Anten; R Sasidharan; M van Zanten
Journal:  Plant Methods       Date:  2020-03-02       Impact factor: 4.993

Review 5.  D-amino Acids in Plants: Sources, Metabolism, and Functions.

Authors:  Üner Kolukisaoglu
Journal:  Int J Mol Sci       Date:  2020-07-30       Impact factor: 5.923

6.  Chromosome-Scale Genome Assembly of Gilia yorkii Enables Genetic Mapping of Floral Traits in an Interspecies Cross.

Authors:  David E Jarvis; Peter J Maughan; Joseph DeTemple; Veronica Mosquera; Zheng Li; Michael S Barker; Leigh A Johnson; Clinton J Whipple
Journal:  Genome Biol Evol       Date:  2022-03-02       Impact factor: 3.416

  6 in total

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