Literature DB >> 29611020

Probing the opportunities for designing anthelmintic leads by sub-structural topology-based QSAR modelling.

Prabodh Ranjan1, Mohd Athar1, Prakash Chandra Jha2, Kari Vijaya Krishna3.   

Abstract

A quantitative structure-activity (QSAR) model has been developed for enriched tubulin inhibitors, which were retrieved from sequence similarity searches and applicability domain analysis. Using partial least square (PLS) method and leave-one-out (LOO) validation approach, the model was generated with the correlation statistics of [Formula: see text] and [Formula: see text] of 0.68 and 0.69, respectively. The present study indicates that topological descriptors, viz. BIC, CH_3_C, IC, JX and Kappa_2 correlate well with biological activity. ADME and toxicity (or ADME/T) assessment showed that out of 260 molecules, 255 molecules successfully passed the ADME/T assessment test, wherein the drug-likeness attributes were exhibited. These results showed that topological indices and the colchicine binding domain directly influence the aetiology of helminthic infections. Further, we anticipate that our model can be applied for guiding and designing potential anthelmintic inhibitors.

Entities:  

Keywords:  ADME/T; Anthelmintic helminth infection; QSAR; Sequence similarity analysis

Mesh:

Substances:

Year:  2018        PMID: 29611020     DOI: 10.1007/s11030-018-9825-4

Source DB:  PubMed          Journal:  Mol Divers        ISSN: 1381-1991            Impact factor:   2.943


  75 in total

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Journal:  J Chem Inf Comput Sci       Date:  2002 Jan-Feb

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5.  Application of linear discriminant analysis in the virtual screening of antichagasic drugs through trypanothione reductase inhibition.

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Journal:  Bioorg Med Chem Lett       Date:  2006-02-07       Impact factor: 2.823

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8.  A molecular modeling and QSAR study of suppressors of the growth of Trypanosoma cruzi epimastigotes.

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9.  Annotation of two large contiguous regions from the Haemonchus contortus genome using RNA-seq and comparative analysis with Caenorhabditis elegans.

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Journal:  PLoS One       Date:  2011-08-15       Impact factor: 3.240

10.  The genome and developmental transcriptome of the strongylid nematode Haemonchus contortus.

Authors:  Erich M Schwarz; Pasi K Korhonen; Bronwyn E Campbell; Neil D Young; Aaron R Jex; Abdul Jabbar; Ross S Hall; Alinda Mondal; Adina C Howe; Jason Pell; Andreas Hofmann; Peter R Boag; Xing-Quan Zhu; T Gregory; Alex Loukas; Brian A Williams; Igor Antoshechkin; C Brown; Paul W Sternberg; Robin B Gasser
Journal:  Genome Biol       Date:  2013-08-28       Impact factor: 13.583

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  1 in total

Review 1.  Prediction Methods of Herbal Compounds in Chinese Medicinal Herbs.

Authors:  Ke Han; Lei Zhang; Miao Wang; Rui Zhang; Chunyu Wang; Chengzhi Zhang
Journal:  Molecules       Date:  2018-09-10       Impact factor: 4.411

  1 in total

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