Literature DB >> 15864673

Structure of glutathione S-transferase of the filarial parasite Wuchereria bancrofti: a target for drug development against adult worm.

Sivaramakrishnan Thirumalai Nathan1, Nisha Mathew, Muthuswami Kalyanasundaram, Kothandapani Balaraman.   

Abstract

A three dimensional structural model of Glutathione-S-transferase (GST) of the lymphatic filarial parasite Wuchereria bancrofti (wb) was constructed by homology modeling. The three dimensional X-ray crystal structure of porcine pi-class GST with PDB ID: 2gsr-A chain protein with 42% sequential and functional homology was used as the template. The model of wbGST built by MODELLER6v2 was analyzed by the PROCHECK programs. Ramachandran plot analysis showed that 93.5% of the residues are in the core region followed by 5.4 and 1.1% residues in the allowed and generously allowed regions, respectively. None of the non-glycine residues is in disallowed regions. The PROSA II z-score and the energy graph for the final model further confirmed the quality of the modeled structure. The computationally modeled three-dimensional (3D) structure of wbGST has been submitted to the Protein Data Bank (PDB) (PDB ID: 1SFM and RCSB ID: RCSB021668). 1SFM was used for docking with GST inhibitors by Hex4.2 macromolecular docking using spherical polar Fourier correlations.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 15864673     DOI: 10.1007/s00894-005-0234-0

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  25 in total

1.  Protein docking using spherical polar Fourier correlations.

Authors:  D W Ritchie; G J Kemp
Journal:  Proteins       Date:  2000-05-01

2.  Identification and localization of glutathione S-transferase as a potential target enzyme in Brugia species.

Authors:  U R Rao; G Salinas; K Mehta; T R Klei
Journal:  Parasitol Res       Date:  2000-11       Impact factor: 2.289

3.  Stereochemical quality of protein structure coordinates.

Authors:  A L Morris; M W MacArthur; E G Hutchinson; J M Thornton
Journal:  Proteins       Date:  1992-04

4.  Onchocerca volvulus: ultrastructural localization of two glutathione S-transferases.

Authors:  G Wildenburg; E Liebau; K Henkle-Dührsen
Journal:  Exp Parasitol       Date:  1998-01       Impact factor: 2.011

5.  Evaluation of comparative protein modeling by MODELLER.

Authors:  A Sali; L Potterton; F Yuan; H van Vlijmen; M Karplus
Journal:  Proteins       Date:  1995-11

Review 6.  Modeling mutations and homologous proteins.

Authors:  A Sali
Journal:  Curr Opin Biotechnol       Date:  1995-08       Impact factor: 9.740

Review 7.  Knowledge-based protein modeling.

Authors:  M S Johnson; N Srinivasan; R Sowdhamini; T L Blundell
Journal:  Crit Rev Biochem Mol Biol       Date:  1994       Impact factor: 8.250

Review 8.  Parasitic helminth glutathione S-transferases: an update on their potential as targets for immuno- and chemotherapy.

Authors:  P M Brophy; D I Pritchard
Journal:  Exp Parasitol       Date:  1994-08       Impact factor: 2.011

9.  Refined crystal structure of porcine class Pi glutathione S-transferase (pGST P1-1) at 2.1 A resolution.

Authors:  H Dirr; P Reinemer; R Huber
Journal:  J Mol Biol       Date:  1994-10-14       Impact factor: 5.469

10.  The relation between the divergence of sequence and structure in proteins.

Authors:  C Chothia; A M Lesk
Journal:  EMBO J       Date:  1986-04       Impact factor: 11.598

View more
  6 in total

1.  In vitro antifilarial activity of glutathione S-transferase inhibitors.

Authors:  Lakshmy Srinivasan; Nisha Mathew; Kalyanasundaram Muthuswamy
Journal:  Parasitol Res       Date:  2009-06-28       Impact factor: 2.289

2.  Biochemical studies on glutathione S-transferase from the bovine filarial worm Setaria digitata.

Authors:  Lakshmy Srinivasan; Nisha Mathew; Twinkle Karunan; Kalyanasundaram Muthuswamy
Journal:  Parasitol Res       Date:  2011-01-05       Impact factor: 2.289

3.  Probing the opportunities for designing anthelmintic leads by sub-structural topology-based QSAR modelling.

Authors:  Prabodh Ranjan; Mohd Athar; Prakash Chandra Jha; Kari Vijaya Krishna
Journal:  Mol Divers       Date:  2018-04-02       Impact factor: 2.943

4.  Studies on filarial GST as a target for antifilarial drug development-in silico and in vitro inhibition of filarial GST by substituted 1,4-naphthoquinones.

Authors:  Nisha Mathew; Lakshmy Srinivasan; Twinkle Karunan; Elango Ayyanar; Kalyanasundaram Muthuswamy
Journal:  J Mol Model       Date:  2011-01-26       Impact factor: 1.810

5.  Three-Dimensional Structure of Arabidopsis thaliana Lipase Predicted by Homology Modeling Method.

Authors:  Abdelmonaem Messaoudi; Hatem Belguith; Jeannette Ben Hamida
Journal:  Evol Bioinform Online       Date:  2011-06-28       Impact factor: 1.625

6.  Evaluation of Wuchereria bancrofti GST as a vaccine candidate for lymphatic filariasis.

Authors:  Anandharaman Veerapathran; Gajalakshmi Dakshinamoorthy; Munirathinam Gnanasekar; Maryada Venkata Rami Reddy; Ramaswamy Kalyanasundaram
Journal:  PLoS Negl Trop Dis       Date:  2009-06-09
  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.