Literature DB >> 29594576

Endophytic bacterial microbiome associated with leaves of genetically modified (AtAREB1) and conventional (BR 16) soybean plants.

Katiúscia Kelli Montanari-Coelho1, Alessandra Tenório Costa1, Julio Cesar Polonio1, João Lúcio Azevedo2, Silvana Regina Rockenbach Marin3, Renata Fuganti-Pagliarini3, Yasunari Fujita4, Kazuko Yamaguchi-Shinozaki4, Kazuo Nakashima5, João Alencar Pamphile6, Alexandre Lima Nepomuceno3.   

Abstract

Plant leaves (phyllosphere) have a great potential for colonization and microbial growth, consisting of a dynamic environment in which several factors can interfere with the microbial population structure. The use of genetically modified (GM) plants has introduced several traits in agriculture, such as the improvement of plant drought tolerance, as observed in the AtAREB1 transcription factor overexpression in soybean (Glycine max L. Merrill). The present study aimed at investigating the taxonomic and functional profile of the leaf microbial community of bacteria found in GM (drought-tolerant event 1Ea2939) and conventional (BR 16) soybean plants. Bacterial DNA was extracted from leaf samples collected from each genotype and used for microbial diversity and richness analysis through the MiSeq Illumina platform. Functional prediction was performed using the PICRUSt tool and the STAMP v 2.1.3 software. The obtainment of the GM event 1Ea2939 showed minimum effects on the microbial community and in the potential for chemical-genetic communication, i.e. in the potential for symbiotic and/or mutualistic interaction between plants and their natural microbiota.

Entities:  

Keywords:  Drought tolerance; Glycine max L. Merrill; MiSeq Illumina; Microbiome; Phyllosphere

Mesh:

Substances:

Year:  2018        PMID: 29594576     DOI: 10.1007/s11274-018-2439-2

Source DB:  PubMed          Journal:  World J Microbiol Biotechnol        ISSN: 0959-3993            Impact factor:   3.312


  46 in total

1.  Metaproteogenomic analysis of microbial communities in the phyllosphere and rhizosphere of rice.

Authors:  Claudia Knief; Nathanaël Delmotte; Samuel Chaffron; Manuel Stark; Gerd Innerebner; Reiner Wassmann; Christian von Mering; Julia A Vorholt
Journal:  ISME J       Date:  2011-12-22       Impact factor: 10.302

2.  Leaf microbiota in an agroecosystem: spatiotemporal variation in bacterial community composition on field-grown lettuce.

Authors:  Gurdeep Rastogi; Adrian Sbodio; Jan J Tech; Trevor V Suslow; Gitta L Coaker; Johan H J Leveau
Journal:  ISME J       Date:  2012-04-26       Impact factor: 10.302

Review 3.  Going back to the roots: the microbial ecology of the rhizosphere.

Authors:  Laurent Philippot; Jos M Raaijmakers; Philippe Lemanceau; Wim H van der Putten
Journal:  Nat Rev Microbiol       Date:  2013-09-23       Impact factor: 60.633

4.  STAMP: statistical analysis of taxonomic and functional profiles.

Authors:  Donovan H Parks; Gene W Tyson; Philip Hugenholtz; Robert G Beiko
Journal:  Bioinformatics       Date:  2014-07-23       Impact factor: 6.937

Review 5.  The Plant Microbiota: Systems-Level Insights and Perspectives.

Authors:  Daniel B Müller; Christine Vogel; Yang Bai; Julia A Vorholt
Journal:  Annu Rev Genet       Date:  2016-09-14       Impact factor: 16.830

6.  The ecology of the phyllosphere: geographic and phylogenetic variability in the distribution of bacteria on tree leaves.

Authors:  Amanda J Redford; Robert M Bowers; Rob Knight; Yan Linhart; Noah Fierer
Journal:  Environ Microbiol       Date:  2010-11       Impact factor: 5.491

7.  Characterization and genomic analysis of a highly chromate resistant and reducing bacterial strain Lysinibacillus fusiformis ZC1.

Authors:  Minyan He; Xiangyang Li; Hongliang Liu; Susan J Miller; Gejiao Wang; Christopher Rensing
Journal:  J Hazard Mater       Date:  2010-09-29       Impact factor: 10.588

Review 8.  Pivotal roles of phyllosphere microorganisms at the interface between plant functioning and atmospheric trace gas dynamics.

Authors:  Françoise Bringel; Ivan Couée
Journal:  Front Microbiol       Date:  2015-05-22       Impact factor: 5.640

9.  Molecular analysis of Culex quinquefasciatus larvae responses to Lysinibacillus sphaericus Bin toxin.

Authors:  Chontida Tangsongcharoen; Natapong Jupatanakul; Boonhiang Promdonkoy; George Dimopoulos; Panadda Boonserm
Journal:  PLoS One       Date:  2017-04-13       Impact factor: 3.240

10.  Enrichment of Cryoconite Hole Anaerobes: Implications for the Subglacial Microbiome.

Authors:  Marek K Zdanowski; Albert Bogdanowicz; Jan Gawor; Robert Gromadka; Dorota Wolicka; Jakub Grzesiak
Journal:  Microb Ecol       Date:  2016-11-07       Impact factor: 4.552

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