Literature DB >> 29578506

CRISPR/Cas9-mediated Targeted Integration In Vivo Using a Homology-mediated End Joining-based Strategy.

Xuan Yao1, Xing Wang1, Junlai Liu2, Linyu Shi3, Pengyu Huang4, Hui Yang5.   

Abstract

As a promising genome editing platform, the CRISPR/Cas9 system has great potential for efficient genetic manipulation, especially for targeted integration of transgenes. However, due to the low efficiency of homologous recombination (HR) and various indel mutations of non-homologous end joining (NHEJ)-based strategies in non-dividing cells, in vivo genome editing remains a great challenge. Here, we describe a homology-mediated end joining (HMEJ)-based CRISPR/Cas9 system for efficient in vivo precise targeted integration. In this system, the targeted genome and the donor vector containing homology arms (~800 bp) flanked by single guide RNA (sgRNA) target sequences are cleaved by CRISPR/Cas9. This HMEJ-based strategy achieves efficient transgene integration in mouse zygotes, as well as in hepatocytes in vivo. Moreover, a HMEJ-based strategy offers an efficient approach for correction of fumarylacetoacetate hydrolase (Fah) mutation in the hepatocytes and rescues Fah-deficiency induced liver failure mice. Taken together, focusing on targeted integration, this HMEJ-based strategy provides a promising tool for a variety of applications, including generation of genetically modified animal models and targeted gene therapies.

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Year:  2018        PMID: 29578506      PMCID: PMC5931719          DOI: 10.3791/56844

Source DB:  PubMed          Journal:  J Vis Exp        ISSN: 1940-087X            Impact factor:   1.355


  23 in total

1.  DNA-free genome editing in plants with preassembled CRISPR-Cas9 ribonucleoproteins.

Authors:  Je Wook Woo; Jungeun Kim; Soon Il Kwon; Claudia Corvalán; Seung Woo Cho; Hyeran Kim; Sang-Gyu Kim; Sang-Tae Kim; Sunghwa Choe; Jin-Soo Kim
Journal:  Nat Biotechnol       Date:  2015-10-19       Impact factor: 54.908

2.  Direct reprogramming of fibroblasts into neural stem cells by defined factors.

Authors:  Dong Wook Han; Natalia Tapia; Andreas Hermann; Kathrin Hemmer; Susanne Höing; Marcos J Araúzo-Bravo; Holm Zaehres; Guangming Wu; Stefan Frank; Sören Moritz; Boris Greber; Ji Hun Yang; Hoon Taek Lee; Jens C Schwamborn; Alexander Storch; Hans R Schöler
Journal:  Cell Stem Cell       Date:  2012-03-22       Impact factor: 24.633

3.  Mouse Genome Editing Using the CRISPR/Cas System.

Authors:  Donald W Harms; Rolen M Quadros; Davide Seruggia; Masato Ohtsuka; Gou Takahashi; Lluis Montoliu; Channabasavaiah B Gurumurthy
Journal:  Curr Protoc Hum Genet       Date:  2014-10-01

4.  Obligate ligation-gated recombination (ObLiGaRe): custom-designed nuclease-mediated targeted integration through nonhomologous end joining.

Authors:  Marcello Maresca; Victor Guosheng Lin; Ning Guo; Yi Yang
Journal:  Genome Res       Date:  2012-11-14       Impact factor: 9.043

5.  Genetic engineering of human pluripotent cells using TALE nucleases.

Authors:  Dirk Hockemeyer; Haoyi Wang; Samira Kiani; Christine S Lai; Qing Gao; John P Cassady; Gregory J Cost; Lei Zhang; Yolanda Santiago; Jeffrey C Miller; Bryan Zeitler; Jennifer M Cherone; Xiangdong Meng; Sarah J Hinkley; Edward J Rebar; Philip D Gregory; Fyodor D Urnov; Rudolf Jaenisch
Journal:  Nat Biotechnol       Date:  2011-07-07       Impact factor: 54.908

6.  Precise in-frame integration of exogenous DNA mediated by CRISPR/Cas9 system in zebrafish.

Authors:  Yu Hisano; Tetsushi Sakuma; Shota Nakade; Rie Ohga; Satoshi Ota; Hitoshi Okamoto; Takashi Yamamoto; Atsuo Kawahara
Journal:  Sci Rep       Date:  2015-03-05       Impact factor: 4.379

7.  Highly efficient CRISPR/Cas9-mediated knock-in in zebrafish by homology-independent DNA repair.

Authors:  Thomas O Auer; Karine Duroure; Anne De Cian; Jean-Paul Concordet; Filippo Del Bene
Journal:  Genome Res       Date:  2013-10-31       Impact factor: 9.043

8.  Microhomology-mediated end-joining-dependent integration of donor DNA in cells and animals using TALENs and CRISPR/Cas9.

Authors:  Shota Nakade; Takuya Tsubota; Yuto Sakane; Satoshi Kume; Naoaki Sakamoto; Masanobu Obara; Takaaki Daimon; Hideki Sezutsu; Takashi Yamamoto; Tetsushi Sakuma; Ken-ichi T Suzuki
Journal:  Nat Commun       Date:  2014-11-20       Impact factor: 14.919

9.  Targeted Gene Knockin in Porcine Somatic Cells Using CRISPR/Cas Ribonucleoproteins.

Authors:  Ki-Eun Park; Chi-Hun Park; Anne Powell; Jessica Martin; David M Donovan; Bhanu P Telugu
Journal:  Int J Mol Sci       Date:  2016-05-26       Impact factor: 5.923

10.  Easi-CRISPR: a robust method for one-step generation of mice carrying conditional and insertion alleles using long ssDNA donors and CRISPR ribonucleoproteins.

Authors:  Rolen M Quadros; Hiromi Miura; Donald W Harms; Hisako Akatsuka; Takehito Sato; Tomomi Aida; Ronald Redder; Guy P Richardson; Yutaka Inagaki; Daisuke Sakai; Shannon M Buckley; Parthasarathy Seshacharyulu; Surinder K Batra; Mark A Behlke; Sarah A Zeiner; Ashley M Jacobi; Yayoi Izu; Wallace B Thoreson; Lisa D Urness; Suzanne L Mansour; Masato Ohtsuka; Channabasavaiah B Gurumurthy
Journal:  Genome Biol       Date:  2017-05-17       Impact factor: 13.583

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  9 in total

Review 1.  Making ends meet: targeted integration of DNA fragments by genome editing.

Authors:  Yutaka Yamamoto; Susan A Gerbi
Journal:  Chromosoma       Date:  2018-07-12       Impact factor: 4.316

2.  Full-length dystrophin restoration via targeted exon integration by AAV-CRISPR in a humanized mouse model of Duchenne muscular dystrophy.

Authors:  Adrian Pickar-Oliver; Veronica Gough; Joel D Bohning; Siyan Liu; Jacqueline N Robinson-Hamm; Heather Daniels; William H Majoros; Garth Devlin; Aravind Asokan; Charles A Gersbach
Journal:  Mol Ther       Date:  2021-09-10       Impact factor: 12.910

3.  Crispr/Cas9-mediated cleavages facilitate homologous recombination during genetic engineering of a large chromosomal region.

Authors:  Fan Zhang; Shuwen Wang; Jiyue Zhu
Journal:  Biotechnol Bioeng       Date:  2020-06-17       Impact factor: 4.395

4.  Generation of Transgenic Cloned Buffalo Embryos Harboring the EGFP Gene in the Y Chromosome Using CRISPR/Cas9-Mediated Targeted Integration.

Authors:  Xiuling Zhao; Junyu Nie; Yuyan Tang; Wengtan He; Kai Xiao; Chunying Pang; Xianwei Liang; Yangqing Lu; Ming Zhang
Journal:  Front Vet Sci       Date:  2020-04-23

5.  Microhomologies are prevalent at Cas9-induced larger deletions.

Authors:  Dominic D G Owens; Adam Caulder; Vincent Frontera; Joe R Harman; Alasdair J Allan; Akin Bucakci; Lucas Greder; Gemma F Codner; Philip Hublitz; Peter J McHugh; Lydia Teboul; Marella F T R de Bruijn
Journal:  Nucleic Acids Res       Date:  2019-08-22       Impact factor: 16.971

Review 6.  Strategies in the delivery of Cas9 ribonucleoprotein for CRISPR/Cas9 genome editing.

Authors:  Song Zhang; Jiangtao Shen; Dali Li; Yiyun Cheng
Journal:  Theranostics       Date:  2021-01-01       Impact factor: 11.556

7.  Large-scale genome editing based on high-capacity adenovectors and CRISPR-Cas9 nucleases rescues full-length dystrophin synthesis in DMD muscle cells.

Authors:  Francesca Tasca; Marcella Brescia; Qian Wang; Jin Liu; Josephine M Janssen; Karoly Szuhai; Manuel A F V Gonçalves
Journal:  Nucleic Acids Res       Date:  2022-07-22       Impact factor: 19.160

8.  Identification of the Sex of Pre-implantation Mouse Embryos Using a Marked Y Chromosome and CRISPR/Cas9.

Authors:  Xiuling Zhao; Wei Wei; Hong Pan; Junyu Nie; Dongrong Chen; Pengfei Zhang; Fumei Chen; Qiang Fu; Erwei Zuo; Yangqing Lu; Ming Zhang
Journal:  Sci Rep       Date:  2019-10-04       Impact factor: 4.379

Review 9.  Current trends in gene recovery mediated by the CRISPR-Cas system.

Authors:  Hyeon-Ki Jang; Beomjong Song; Gue-Ho Hwang; Sangsu Bae
Journal:  Exp Mol Med       Date:  2020-07-10       Impact factor: 8.718

  9 in total

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