Literature DB >> 29569853

Revealing Factors Influencing the Fluorine-Centered Non-Covalent Interactions in Some Fluorine-Substituted Molecular Complexes: Insights from First-Principles Studies.

Arpita Varadwaj1, Pradeep R Varadwaj1, Helder M Marques2, Koichi Yamashita1.   

Abstract

We examine the equilibrium structure and properties of six fully or partially fluorinated hydrocarbons and several of their binary complexes using computational methods. In the monomers, the electrostatic surface of the fluorine is predicted to be either entirely negative or weakly positive. However, its lateral sites are always negative. This enables the fluorine to display an anisotropic distribution of charge density on its electrostatic surface. While this is the electrostatic surface scenario of the fluorine atom, its negative sites in some of these monomers are shown to have the potential to engage in attractive engagements with the negative site(s) on the same atom in another molecule of the same type, or a molecule of a different type, to form bimolecular complexes. This is revealed by analyzing the results of current state-of-the-art computational approaches such as DFT, together with those obtained from the quantum theory of atoms in molecules, molecular electrostatic surface potential and symmetry adapted perturbation theories. We demonstrate that the intermolecular interaction energy arising in part from the universal London dispersion, which has been underappreciated for decades, is an essential factor in explaining the attraction between the negative sites, although energy arising from polarization strengthens the extent of the intermolecular interactions in these complexes.
© 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  DFT calculations; molecular complexes; non-covalent interactions; polarization and dispersion

Year:  2018        PMID: 29569853     DOI: 10.1002/cphc.201800023

Source DB:  PubMed          Journal:  Chemphyschem        ISSN: 1439-4235            Impact factor:   3.102


  6 in total

Review 1.  The Pnictogen Bond: The Covalently Bound Arsenic Atom in Molecular Entities in Crystals as a Pnictogen Bond Donor.

Authors:  Arpita Varadwaj; Pradeep R Varadwaj; Helder M Marques; Koichi Yamashita
Journal:  Molecules       Date:  2022-05-25       Impact factor: 4.927

Review 2.  The Stibium Bond or the Antimony-Centered Pnictogen Bond: The Covalently Bound Antimony Atom in Molecular Entities in Crystal Lattices as a Pnictogen Bond Donor.

Authors:  Arpita Varadwaj; Pradeep R Varadwaj; Helder M Marques; Koichi Yamashita
Journal:  Int J Mol Sci       Date:  2022-04-23       Impact factor: 6.208

Review 3.  The Phosphorus Bond, or the Phosphorus-Centered Pnictogen Bond: The Covalently Bound Phosphorus Atom in Molecular Entities and Crystals as a Pnictogen Bond Donor.

Authors:  Pradeep R Varadwaj; Arpita Varadwaj; Helder M Marques; Koichi Yamashita
Journal:  Molecules       Date:  2022-02-23       Impact factor: 4.411

4.  σ-Hole and LP-Hole Interactions of Pnicogen···Pnicogen Homodimers under the External Electric Field Effect: A Quantum Mechanical Study.

Authors:  Mahmoud A A Ibrahim; Nayra A M Moussa; Sherif M A Saad; Muhammad Naeem Ahmed; Ahmed M Shawky; Mahmoud E S Soliman; Gamal A H Mekhemer; Al-Shimaa S M Rady
Journal:  ACS Omega       Date:  2022-03-22

5.  On the Potentiality of X-T-X3 Compounds (T = C, Si, and Ge, and X = F, Cl, and Br) as Tetrel- and Halogen-Bond Donors.

Authors:  Mahmoud A A Ibrahim; Nayra A M Moussa; Mahmoud E S Soliman; Mahmoud F Moustafa; Jabir H Al-Fahemi; H R Abd El-Mageed
Journal:  ACS Omega       Date:  2021-07-16

6.  Type I-IV Halogen⋯Halogen Interactions: A Comparative Theoretical Study in Halobenzene⋯Halobenzene Homodimers.

Authors:  Mahmoud A A Ibrahim; Rehab R A Saeed; Mohammed N I Shehata; Muhammad Naeem Ahmed; Ahmed M Shawky; Manal M Khowdiary; Eslam B Elkaeed; Mahmoud E S Soliman; Nayra A M Moussa
Journal:  Int J Mol Sci       Date:  2022-03-14       Impact factor: 5.923

  6 in total

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