Literature DB >> 29555443

Incorporating repeating temporal association rules in Naïve Bayes classifiers for coronary heart disease diagnosis.

Kalia Orphanou1, Arianna Dagliati2, Lucia Sacchi3, Athena Stassopoulou4, Elpida Keravnou5, Riccardo Bellazzi6.   

Abstract

In this paper, we develop a Naïve Bayes classification model integrated with temporal association rules (TARs). A temporal pattern mining algorithm is used to detect TARs by identifying the most frequent temporal relationships among the derived basic temporal abstractions (TA). We develop and compare three classifiers that use as features the most frequent TARs as follows: (i) representing the most frequent TARs detected within the target class ('Disease = Present'), (ii) representing the most frequent TARs from both classes ('Disease = Present', 'Disease = Absent'), (iii) representing the most frequent TARs, after removing the ones that are low-risk predictors for the disease. These classifiers incorporate the horizontal support of TARs, which defines the number of times that a particular temporal pattern is found in some patient's record, as their features. All of the developed classifiers are applied for diagnosis of coronary heart disease (CHD) using a longitudinal dataset. We compare two ways of feature representation, using horizontal support or the mean duration of each TAR, on a single patient. The results obtained from this comparison show that the horizontal support representation outperforms the mean duration. The main effort of our research is to demonstrate that where long time periods are of significance in some medical domain, such as the CHD domain, the detection of the repeated occurrences of the most frequent TARs can yield better performances. We compared the classifier that uses the horizontal support representation and has the best performance with a Baseline Classifier which uses the binary representation of the most frequent TARs. The results obtained illustrate the comparatively high performance of the classifier representing the horizontal support, over the Baseline Classifier.
Copyright © 2018 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Bayesian models; Temporal abstraction; Temporal association rules; Temporal reasoning; Time series classification

Mesh:

Year:  2018        PMID: 29555443     DOI: 10.1016/j.jbi.2018.03.002

Source DB:  PubMed          Journal:  J Biomed Inform        ISSN: 1532-0464            Impact factor:   6.317


  4 in total

1.  Modeling asynchronous event sequences with RNNs.

Authors:  Stephen Wu; Sijia Liu; Sunghwan Sohn; Sungrim Moon; Chung-Il Wi; Young Juhn; Hongfang Liu
Journal:  J Biomed Inform       Date:  2018-06-05       Impact factor: 6.317

2.  Exploration of Machine Learning for Hyperuricemia Prediction Models Based on Basic Health Checkup Tests.

Authors:  Sangwoo Lee; Eun Kyung Choe; Boram Park
Journal:  J Clin Med       Date:  2019-02-02       Impact factor: 4.241

3.  Feature engineering with clinical expert knowledge: A case study assessment of machine learning model complexity and performance.

Authors:  Kenneth D Roe; Vibhu Jawa; Xiaohan Zhang; Christopher G Chute; Jeremy A Epstein; Jordan Matelsky; Ilya Shpitser; Casey Overby Taylor
Journal:  PLoS One       Date:  2020-04-23       Impact factor: 3.240

4.  A novel approach for heart disease prediction using strength scores with significant predictors.

Authors:  Armin Yazdani; Kasturi Dewi Varathan; Yin Kia Chiam; Asad Waqar Malik; Wan Azman Wan Ahmad
Journal:  BMC Med Inform Decis Mak       Date:  2021-06-21       Impact factor: 2.796

  4 in total

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