Literature DB >> 29555185

Genomic Approaches to Posttraumatic Stress Disorder: The Psychiatric Genomic Consortium Initiative.

Caroline M Nievergelt1, Allison E Ashley-Koch2, Shareefa Dalvie3, Michael A Hauser2, Rajendra A Morey4, Alicia K Smith5, Monica Uddin6.   

Abstract

Posttraumatic stress disorder (PTSD) after exposure to a traumatic event is a highly prevalent psychiatric disorder. Heritability estimates from twin studies as well as from recent molecular data (single nucleotide polymorphism-based heritability) indicate moderate to high heritability, yet robust genetic variants for PTSD have not yet been identified and the genetic architecture of this polygenic disorder remains largely unknown. To date, fewer than 10 large-scale genome-wide association studies of PTSD have been published, with findings that highlight the unique challenges for PTSD genomics, including a complex diagnostic entity with contingency of PTSD diagnosis on trauma exposure and the large genetic diversity of the study populations. The Psychiatric Genomics Consortium PTSD group has brought together more than 200 scientists with the goal to increase sample size for genome-wide association studies and other genomic analyses to sufficient numbers where robust discoveries of molecular signatures can be achieved. The sample currently includes more than 32,000 PTSD cases and 100,000 trauma-exposed control subjects, and collection is ongoing. The first results found a significant shared genetic risk of PTSD with other psychiatric disorders and sex-biased heritability estimates with higher heritability in female individuals compared with male individuals. This review describes the scope and current focus of the Psychiatric Genomics Consortium PTSD group and its expansion from the initial genome-wide association study group to nine working groups, including epigenetics, gene expression, imaging, and integrative systems biology. We further briefly outline recent findings and future directions of "omics"-based studies of PTSD, with the ultimate goal of elucidating the molecular architecture of this complex disorder to improve prevention and intervention strategies.
Copyright © 2018 Society of Biological Psychiatry. All rights reserved.

Entities:  

Keywords:  Epigenetics; Gene expression; Genetics; Imaging; Psychiatric Genomics Consortium (PGC); Systems biology

Mesh:

Year:  2018        PMID: 29555185      PMCID: PMC5915904          DOI: 10.1016/j.biopsych.2018.01.020

Source DB:  PubMed          Journal:  Biol Psychiatry        ISSN: 0006-3223            Impact factor:   13.382


  95 in total

Review 1.  Posttraumatic stress disorder: A metabolic disorder in disguise?

Authors:  Vasiliki Michopoulos; Aimee Vester; Gretchen Neigh
Journal:  Exp Neurol       Date:  2016-05-28       Impact factor: 5.330

2.  Multimodal profiling of single-cell morphology, electrophysiology, and gene expression using Patch-seq.

Authors:  Cathryn R Cadwell; Federico Scala; Shuang Li; Giulia Livrizzi; Shan Shen; Rickard Sandberg; Xiaolong Jiang; Andreas S Tolias
Journal:  Nat Protoc       Date:  2017-11-16       Impact factor: 13.491

Review 3.  Dissecting the genetics of complex traits using summary association statistics.

Authors:  Bogdan Pasaniuc; Alkes L Price
Journal:  Nat Rev Genet       Date:  2016-11-14       Impact factor: 53.242

4.  AnyExpress: integrated toolkit for analysis of cross-platform gene expression data using a fast interval matching algorithm.

Authors:  Jihoon Kim; Kiltesh Patel; Hyunchul Jung; Winston P Kuo; Lucila Ohno-Machado
Journal:  BMC Bioinformatics       Date:  2011-03-17       Impact factor: 3.307

Review 5.  Post-traumatic stress disorder.

Authors:  Rachel Yehuda; Charles W Hoge; Alexander C McFarlane; Eric Vermetten; Ruth A Lanius; Caroline M Nievergelt; Stevan E Hobfoll; Karestan C Koenen; Thomas C Neylan; Steven E Hyman
Journal:  Nat Rev Dis Primers       Date:  2015-10-08       Impact factor: 52.329

6.  Genetic markers for PTSD risk and resilience among survivors of the World Trade Center attacks.

Authors:  Casey Sarapas; Guiqing Cai; Linda M Bierer; Julia A Golier; Sandro Galea; Marcus Ising; Theo Rein; James Schmeidler; Bertram Müller-Myhsok; Manfred Uhr; Florian Holsboer; Joseph D Buxbaum; Rachel Yehuda
Journal:  Dis Markers       Date:  2011       Impact factor: 3.434

7.  Molecular and functional variation in iPSC-derived sensory neurons.

Authors:  Jeremy Schwartzentruber; Stefanie Foskolou; Helena Kilpinen; Julia Rodrigues; Kaur Alasoo; Andrew J Knights; Minal Patel; Angela Goncalves; Rita Ferreira; Caroline Louise Benn; Anna Wilbrey; Magda Bictash; Emma Impey; Lishuang Cao; Sergio Lainez; Alexandre Julien Loucif; Paul John Whiting; Alex Gutteridge; Daniel J Gaffney
Journal:  Nat Genet       Date:  2017-12-11       Impact factor: 38.330

8.  Human cerebral organoids recapitulate gene expression programs of fetal neocortex development.

Authors:  J Gray Camp; Farhath Badsha; Marta Florio; Sabina Kanton; Tobias Gerber; Michaela Wilsch-Bräuninger; Eric Lewitus; Alex Sykes; Wulf Hevers; Madeline Lancaster; Juergen A Knoblich; Robert Lachmann; Svante Pääbo; Wieland B Huttner; Barbara Treutlein
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-07       Impact factor: 11.205

9.  Smaller Hippocampal Volume in Posttraumatic Stress Disorder: A Multisite ENIGMA-PGC Study: Subcortical Volumetry Results From Posttraumatic Stress Disorder Consortia.

Authors:  Mark W Logue; Sanne J H van Rooij; Emily L Dennis; Sarah L Davis; Jasmeet P Hayes; Jennifer S Stevens; Maria Densmore; Courtney C Haswell; Jonathan Ipser; Saskia B J Koch; Mayuresh Korgaonkar; Lauren A M Lebois; Matthew Peverill; Justin T Baker; Premika S W Boedhoe; Jessie L Frijling; Staci A Gruber; Ilan Harpaz-Rotem; Neda Jahanshad; Sheri Koopowitz; Ifat Levy; Laura Nawijn; Lauren O'Connor; Miranda Olff; David H Salat; Margaret A Sheridan; Jeffrey M Spielberg; Mirjam van Zuiden; Sherry R Winternitz; Jonathan D Wolff; Erika J Wolf; Xin Wang; Kristen Wrocklage; Chadi G Abdallah; Richard A Bryant; Elbert Geuze; Tanja Jovanovic; Milissa L Kaufman; Anthony P King; John H Krystal; Jim Lagopoulos; Maxwell Bennett; Ruth Lanius; Israel Liberzon; Regina E McGlinchey; Katie A McLaughlin; William P Milberg; Mark W Miller; Kerry J Ressler; Dick J Veltman; Dan J Stein; Kathleen Thomaes; Paul M Thompson; Rajendra A Morey
Journal:  Biol Psychiatry       Date:  2017-09-20       Impact factor: 12.810

10.  A hybrid imputation approach for microarray missing value estimation.

Authors:  Huihui Li; Changbo Zhao; Fengfeng Shao; Guo-Zheng Li; Xiao Wang
Journal:  BMC Genomics       Date:  2015-08-17       Impact factor: 3.969

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  18 in total

1.  Genomics of posttraumatic stress disorder in veterans: Methods and rationale for Veterans Affairs Cooperative Study #575B.

Authors:  Krishnan Radhakrishnan; Mihaela Aslan; Kelly M Harrington; Robert H Pietrzak; Grant Huang; Sumitra Muralidhar; Kelly Cho; Rachel Quaden; David Gagnon; Saiju Pyarajan; Ning Sun; Hongyu Zhao; Michael Gaziano; John Concato; Murray B Stein; Joel Gelernter
Journal:  Int J Methods Psychiatr Res       Date:  2019-02-14       Impact factor: 4.035

2.  Sex-heterogeneous SNPs disproportionately influence gene expression and health.

Authors:  Michela Traglia; Margaux Bout; Lauren A Weiss
Journal:  PLoS Genet       Date:  2022-05-05       Impact factor: 6.020

Review 3.  Genomic updates in understanding PTSD.

Authors:  Sumeet Sharma; Kerry J Ressler
Journal:  Prog Neuropsychopharmacol Biol Psychiatry       Date:  2018-11-16       Impact factor: 5.067

Review 4.  Chromosomes to Social Contexts: Sex and Gender Differences in PTSD.

Authors:  Rachel Kimerling; Monica C Allen; Laramie E Duncan
Journal:  Curr Psychiatry Rep       Date:  2018-10-22       Impact factor: 5.285

Review 5.  Posttraumatic stress disorder: from gene discovery to disease biology.

Authors:  Renato Polimanti; Frank R Wendt
Journal:  Psychol Med       Date:  2021-02-15       Impact factor: 10.592

Review 6.  The Role of the Eukaryotic Translation Initiation Factor 4E (eIF4E) in Neuropsychiatric Disorders.

Authors:  Inês S Amorim; Gilliard Lach; Christos G Gkogkas
Journal:  Front Genet       Date:  2018-11-23       Impact factor: 4.599

7.  Genetic variation is associated with PTSD risk and aversive memory: Evidence from two trauma-Exposed African samples and one healthy European sample.

Authors:  Sarah Wilker; Anna Schneider; Daniela Conrad; Anett Pfeiffer; Christina Boeck; Birke Lingenfelder; Virginie Freytag; Vanja Vukojevic; Christian Vogler; Annette Milnik; Andreas Papassotiropoulos; Dominique J-F de Quervain; Thomas Elbert; Stephan Kolassa; Iris-Tatjana Kolassa
Journal:  Transl Psychiatry       Date:  2018-11-22       Impact factor: 6.222

8.  International meta-analysis of PTSD genome-wide association studies identifies sex- and ancestry-specific genetic risk loci.

Authors:  Caroline M Nievergelt; Adam X Maihofer; Torsten Klengel; Elizabeth G Atkinson; Chia-Yen Chen; Karmel W Choi; Jonathan R I Coleman; Shareefa Dalvie; Laramie E Duncan; Joel Gelernter; Daniel F Levey; Mark W Logue; Renato Polimanti; Allison C Provost; Andrew Ratanatharathorn; Murray B Stein; Katy Torres; Allison E Aiello; Lynn M Almli; Ananda B Amstadter; Søren B Andersen; Ole A Andreassen; Paul A Arbisi; Allison E Ashley-Koch; S Bryn Austin; Esmina Avdibegovic; Dragan Babić; Marie Bækvad-Hansen; Dewleen G Baker; Jean C Beckham; Laura J Bierut; Jonathan I Bisson; Marco P Boks; Elizabeth A Bolger; Anders D Børglum; Bekh Bradley; Megan Brashear; Gerome Breen; Richard A Bryant; Angela C Bustamante; Jonas Bybjerg-Grauholm; Joseph R Calabrese; José M Caldas-de-Almeida; Anders M Dale; Mark J Daly; Nikolaos P Daskalakis; Jürgen Deckert; Douglas L Delahanty; Michelle F Dennis; Seth G Disner; Katharina Domschke; Alma Dzubur-Kulenovic; Christopher R Erbes; Alexandra Evans; Lindsay A Farrer; Norah C Feeny; Janine D Flory; David Forbes; Carol E Franz; Sandro Galea; Melanie E Garrett; Bizu Gelaye; Elbert Geuze; Charles Gillespie; Aferdita Goci Uka; Scott D Gordon; Guia Guffanti; Rasha Hammamieh; Supriya Harnal; Michael A Hauser; Andrew C Heath; Sian M J Hemmings; David Michael Hougaard; Miro Jakovljevic; Marti Jett; Eric Otto Johnson; Ian Jones; Tanja Jovanovic; Xue-Jun Qin; Angela G Junglen; Karen-Inge Karstoft; Milissa L Kaufman; Ronald C Kessler; Alaptagin Khan; Nathan A Kimbrel; Anthony P King; Nastassja Koen; Henry R Kranzler; William S Kremen; Bruce R Lawford; Lauren A M Lebois; Catrin E Lewis; Sarah D Linnstaedt; Adriana Lori; Bozo Lugonja; Jurjen J Luykx; Michael J Lyons; Jessica Maples-Keller; Charles Marmar; Alicia R Martin; Nicholas G Martin; Douglas Maurer; Matig R Mavissakalian; Alexander McFarlane; Regina E McGlinchey; Katie A McLaughlin; Samuel A McLean; Sarah McLeay; Divya Mehta; William P Milberg; Mark W Miller; Rajendra A Morey; Charles Phillip Morris; Ole Mors; Preben B Mortensen; Benjamin M Neale; Elliot C Nelson; Merete Nordentoft; Sonya B Norman; Meaghan O'Donnell; Holly K Orcutt; Matthew S Panizzon; Edward S Peters; Alan L Peterson; Matthew Peverill; Robert H Pietrzak; Melissa A Polusny; John P Rice; Stephan Ripke; Victoria B Risbrough; Andrea L Roberts; Alex O Rothbaum; Barbara O Rothbaum; Peter Roy-Byrne; Ken Ruggiero; Ariane Rung; Bart P F Rutten; Nancy L Saccone; Sixto E Sanchez; Dick Schijven; Soraya Seedat; Antonia V Seligowski; Julia S Seng; Christina M Sheerin; Derrick Silove; Alicia K Smith; Jordan W Smoller; Scott R Sponheim; Dan J Stein; Jennifer S Stevens; Jennifer A Sumner; Martin H Teicher; Wesley K Thompson; Edward Trapido; Monica Uddin; Robert J Ursano; Leigh Luella van den Heuvel; Miranda Van Hooff; Eric Vermetten; Christiaan H Vinkers; Joanne Voisey; Yunpeng Wang; Zhewu Wang; Thomas Werge; Michelle A Williams; Douglas E Williamson; Sherry Winternitz; Christiane Wolf; Erika J Wolf; Jonathan D Wolff; Rachel Yehuda; Ross McD Young; Keith A Young; Hongyu Zhao; Lori A Zoellner; Israel Liberzon; Kerry J Ressler; Magali Haas; Karestan C Koenen
Journal:  Nat Commun       Date:  2019-10-08       Impact factor: 14.919

9.  Genetic predictors of hippocampal subfield volume in PTSD cases and trauma-exposed controls.

Authors:  Rajendra A Morey; Melanie E Garrett; Jennifer S Stevens; Emily K Clarke; Courtney C Haswell; Sanne J H van Rooij; Negar Fani; Adriana Lori; Va Mid-Atlantic Mirecc Workgroup; Nathan A Kimbrel; Michelle F Dennis; Christine E Marx; Jean C Beckham; Gregory McCarthy; Michael A Hauser; Allison E Ashley-Koch
Journal:  Eur J Psychotraumatol       Date:  2020-07-29

Review 10.  Literature review and methodological considerations for understanding circulating risk biomarkers following trauma exposure.

Authors:  Sarah D Linnstaedt; Anthony S Zannas; Samuel A McLean; Karestan C Koenen; Kerry J Ressler
Journal:  Mol Psychiatry       Date:  2019-12-20       Impact factor: 15.992

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