Literature DB >> 29553551

Quantifying X-Ray Fluorescence Data Using MAPS.

Tara Nietzold1, Bradley M West2, Michael Stuckelberger2, Barry Lai3, Stefan Vogt3, Mariana I Bertoni4.   

Abstract

The quantification of X-ray fluorescence (XRF) microscopy maps by fitting the raw spectra to a known standard is crucial for evaluating chemical composition and elemental distribution within a material. Synchrotron-based XRF has become an integral characterization technique for a variety of research topics, particularly due to its non-destructive nature and its high sensitivity. Today, synchrotrons can acquire fluorescence data at spatial resolutions well below a micron, allowing for the evaluation of compositional variations at the nanoscale. Through proper quantification, it is then possible to obtain an in-depth, high-resolution understanding of elemental segregation, stoichiometric relationships, and clustering behavior. This article explains how to use the MAPS fitting software developed by Argonne National Laboratory for the quantification of full 2-D XRF maps. We use as an example results from a Cu(In,Ga)Se2 solar cell, taken at the Advanced Photon Source beamline 2-ID-D at Argonne National Laboratory. We show the standard procedure for fitting raw data, demonstrate how to evaluate the quality of a fit and present the typical outputs generated by the program. In addition, we discuss in this manuscript certain software limitations and offer suggestions for how to further correct the data to be numerically accurate and representative of spatially resolved, elemental concentrations.

Mesh:

Year:  2018        PMID: 29553551      PMCID: PMC5931319          DOI: 10.3791/56042

Source DB:  PubMed          Journal:  J Vis Exp        ISSN: 1940-087X            Impact factor:   1.355


  9 in total

1.  Quantifying trace elements in individual aquatic protist cells with a synchrotron X-ray fluorescence microprobe.

Authors:  Benjamin S Twining; Stephen B Baines; Nicholas S Fisher; Jörg Maser; Stefan Vogt; Chris Jacobsen; Antonio Tovar-Sanchez; Sergio A Sañudo-Wilhelmy
Journal:  Anal Chem       Date:  2003-08-01       Impact factor: 6.986

2.  Quantitative 3D elemental microtomography of Cyclotella meneghiniana at 400-nm resolution.

Authors:  Martin D de Jonge; Christian Holzner; Stephen B Baines; Benjamin S Twining; Konstantin Ignatyev; Julia Diaz; Daryl L Howard; Daniel Legnini; Antonino Miceli; Ian McNulty; Chris J Jacobsen; Stefan Vogt
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-18       Impact factor: 11.205

3.  Elemental and redox analysis of single bacterial cells by x-ray microbeam analysis.

Authors:  Kenneth M Kemner; Shelly D Kelly; Barry Lai; Joerg Maser; Edward J O'loughlin; Deirdre Sholto-Douglas; Zhonghou Cai; Mark A Schneegurt; Charles F Kulpa; Kenneth H Nealson
Journal:  Science       Date:  2004-10-22       Impact factor: 47.728

4.  ATHENA, ARTEMIS, HEPHAESTUS: data analysis for X-ray absorption spectroscopy using IFEFFIT.

Authors:  B Ravel; M Newville
Journal:  J Synchrotron Radiat       Date:  2005-06-15       Impact factor: 2.616

Review 5.  X-ray fluorescence microprobe imaging in biology and medicine.

Authors:  Tatjana Paunesku; Stefan Vogt; Jörg Maser; Barry Lai; Gayle Woloschak
Journal:  J Cell Biochem       Date:  2006-12-15       Impact factor: 4.429

6.  Secondary fluorescence enhancement in confocal X-ray microscopy analysis.

Authors:  Dimosthenis Sokaras; Andreas-Germanos Karydas
Journal:  Anal Chem       Date:  2009-06-15       Impact factor: 6.986

7.  X-ray fluorescence at nanoscale resolution for multicomponent layered structures: a solar cell case study.

Authors:  Bradley M West; Michael Stuckelberger; April Jeffries; Srikanth Gangam; Barry Lai; Benjamin Stripe; Jörg Maser; Volker Rose; Stefan Vogt; Mariana I Bertoni
Journal:  J Synchrotron Radiat       Date:  2017-01-01       Impact factor: 2.616

8.  X-ray fluorescence and energy dispersive x-ray diffraction for the quantification of elemental concentrations in breast tissue.

Authors:  K Geraki; M J Farquharson; D A Bradley
Journal:  Phys Med Biol       Date:  2004-01-07       Impact factor: 3.609

9.  Enhancement in statistical and image analysis for in situ µSXRF studies of elemental distribution and co-localization, using Dioscorea balcanica.

Authors:  Tanja Dučić; Manuela Borchert; Aleksandar Savić; Aleksandar Kalauzi; Aleksandra Mitrović; Ksenija Radotić
Journal:  J Synchrotron Radiat       Date:  2013-01-29       Impact factor: 2.616

  9 in total
  4 in total

1.  Localization of the Locus Coeruleus in the Mouse Brain.

Authors:  Katharina Schmidt; Bilal Bari; Martina Ralle; Clorissa Washington-Hughes; Abigael Muchenditsi; Evan Maxey; Svetlana Lutsenko
Journal:  J Vis Exp       Date:  2019-03-07       Impact factor: 1.355

2.  X-ray fluorescence microscopy scanning of Drosophila oocytes and eggs.

Authors:  Qinan Hu; Olga A Antipova; Thomas V O'Halloran; Mariana F Wolfner
Journal:  STAR Protoc       Date:  2020-12-30

3.  PIN FORMED 2 Modulates the Transport of Arsenite in Arabidopsis thaliana.

Authors:  Mohammad Arif Ashraf; Kana Umetsu; Olena Ponomarenko; Michiko Saito; Mohammad Aslam; Olga Antipova; Natalia Dolgova; Cheyenne D Kiani; Susan Nehzati; Keitaro Tanoi; Katsuyuki Minegishi; Kotaro Nagatsu; Takehiro Kamiya; Toru Fujiwara; Christian Luschnig; Karen Tanino; Ingrid Pickering; Graham N George; Abidur Rahman
Journal:  Plant Commun       Date:  2019-11-21

4.  A first-in-human phase 0 clinical study of RNA interference-based spherical nucleic acids in patients with recurrent glioblastoma.

Authors:  Priya Kumthekar; Caroline H Ko; Tatjana Paunesku; Karan Dixit; Adam M Sonabend; Orin Bloch; Matthew Tate; Margaret Schwartz; Laura Zuckerman; Ray Lezon; Rimas V Lukas; Borko Jovanovic; Kathleen McCortney; Howard Colman; Si Chen; Barry Lai; Olga Antipova; Junjing Deng; Luxi Li; Serena Tommasini-Ghelfi; Lisa A Hurley; Dusten Unruh; Nitya V Sharma; Manoj Kandpal; Fotini M Kouri; Ramana V Davuluri; Daniel J Brat; Miguel Muzzio; Mitchell Glass; Vinod Vijayakumar; Jeremy Heidel; Francis J Giles; Ann K Adams; C David James; Gayle E Woloschak; Craig Horbinski; Alexander H Stegh
Journal:  Sci Transl Med       Date:  2021-03-10       Impact factor: 17.956

  4 in total

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